RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 RGPD3A6NKT7 1758 aaPredicted RBP33.21■■■□□ 2.91
CPNE1-212ENST00000430570 RGPD4Q7Z3J3 1758 aa33.21■■■□□ 2.91
CPNE1-212ENST00000430570 CCER2I3L3R5 266 aa33.21■■■□□ 2.91
CPNE1-212ENST00000430570 HTATSF1O43719 755 aaKnown RBP33.21■■■□□ 2.91
CPNE1-212ENST00000430570 CEMIPQ8WUJ3 1361 aa33.2■■■□□ 2.91
CPNE1-212ENST00000430570 RIPK4P57078 832 aa33.2■■■□□ 2.91
CPNE1-212ENST00000430570 FAM9BQ8IZU0 186 aa33.2■■■□□ 2.91
CPNE1-212ENST00000430570 MRC1P22897 1456 aa33.2■■■□□ 2.9
CPNE1-212ENST00000430570 PALLDQ8WX93 1383 aa33.18■■■□□ 2.9
CPNE1-212ENST00000430570 RREB1Q92766 1687 aa33.18■■■□□ 2.9
CPNE1-212ENST00000430570 NEUROD2Q15784 382 aa33.18■■■□□ 2.9
CPNE1-212ENST00000430570 APAF1O14727 1248 aa33.17■■■□□ 2.9
CPNE1-212ENST00000430570 KCNQ4P56696 695 aa33.17■■■□□ 2.9
CPNE1-212ENST00000430570 SMARCC1Q92922 1105 aaPredicted RBP33.17■■■□□ 2.9
CPNE1-212ENST00000430570 LRRC4BQ9NT99 713 aa33.16■■■□□ 2.9
CPNE1-212ENST00000430570 LY75O60449 1722 aa33.16■■■□□ 2.9
CPNE1-212ENST00000430570 TEFQ10587 303 aa33.15■■■□□ 2.9
CPNE1-212ENST00000430570 THUMPD2Q9BTF0 503 aaKnown RBP33.15■■■□□ 2.9
CPNE1-212ENST00000430570 SENP3-EIF4A1A0A087X0R7 540 aa33.13■■■□□ 2.89
CPNE1-212ENST00000430570 SLC39A6Q13433 755 aa33.13■■■□□ 2.89
CPNE1-212ENST00000430570 NUP188Q5SRE5 1749 aa33.13■■■□□ 2.89
CPNE1-212ENST00000430570 SIPA1L3O60292 1781 aaPredicted RBP33.12■■■□□ 2.89
CPNE1-212ENST00000430570 CCNL1Q9UK58 526 aaPredicted RBP33.11■■■□□ 2.89
CPNE1-212ENST00000430570 TRIM35Q9UPQ4 493 aa33.11■■■□□ 2.89
CPNE1-212ENST00000430570 SLC27A3Q5K4L6 730 aa33.1■■■□□ 2.89
CPNE1-212ENST00000430570 LOC102724428A0A0B4J2F2 783 aa33.08■■■□□ 2.89
CPNE1-212ENST00000430570 SIK1P57059 783 aa33.08■■■□□ 2.89
CPNE1-212ENST00000430570 SLC4A9Q96Q91 983 aa33.07■■■□□ 2.88
CPNE1-212ENST00000430570 RBM42Q9BTD8 480 aaKnown RBP33.06■■■□□ 2.88
CPNE1-212ENST00000430570 PAPPAQ13219 1627 aa33.06■■■□□ 2.88
CPNE1-212ENST00000430570 PTCD1O75127 700 aaKnown RBP33.05■■■□□ 2.88
CPNE1-212ENST00000430570 LMOD3Q0VAK6 560 aa33.05■■■□□ 2.88
CPNE1-212ENST00000430570 ANO8Q9HCE9 1232 aaPredicted RBP33.05■■■□□ 2.88
CPNE1-212ENST00000430570 BTBD11A6QL63 1104 aa33.04■■■□□ 2.88
CPNE1-212ENST00000430570 KCNQ3O43525 872 aa33.04■■■□□ 2.88
CPNE1-212ENST00000430570 TAF7Q15545 349 aaPredicted RBP33.04■■■□□ 2.88
CPNE1-212ENST00000430570 MIS18AQ9NYP9 233 aa33.03■■■□□ 2.88
CPNE1-212ENST00000430570 ATP6V1AP38606 617 aa33.02■■■□□ 2.88
CPNE1-212ENST00000430570 ITPK1Q13572 414 aa33.02■■■□□ 2.88
CPNE1-212ENST00000430570 ZNF790Q6PG37 636 aa33.02■■■□□ 2.88
CPNE1-212ENST00000430570 NBPF14Q5TI25 921 aa33.01■■■□□ 2.87
CPNE1-212ENST00000430570 KCPQ6ZWJ8 1503 aa33■■■□□ 2.87
CPNE1-212ENST00000430570 TTC5Q8N0Z6 440 aa32.99■■■□□ 2.87
CPNE1-212ENST00000430570 ZNF827Q17R98 1081 aa32.98■■■□□ 2.87
CPNE1-212ENST00000430570 LINC00116Q8NCU8 138 aa32.98■■■□□ 2.87
CPNE1-212ENST00000430570 TAF1LQ8IZX4 1826 aa32.97■■■□□ 2.87
CPNE1-212ENST00000430570 ZNF496Q96IT1 587 aaPredicted RBP32.97■■■□□ 2.87
CPNE1-212ENST00000430570 UBR2Q8IWV8 1755 aa32.96■■■□□ 2.87
CPNE1-212ENST00000430570 PSDA5PKW4 1024 aaPredicted RBP32.96■■■□□ 2.87
CPNE1-212ENST00000430570 R3HDM1Q15032 1099 aaKnown RBP32.96■■■□□ 2.87
CPNE1-212ENST00000430570 AKT1S1Q96B36 256 aa32.96■■■□□ 2.87
CPNE1-212ENST00000430570 SALL2Q9Y467 1007 aaPredicted RBP32.96■■■□□ 2.87
CPNE1-212ENST00000430570 C5P01031 1676 aa32.95■■■□□ 2.87
CPNE1-212ENST00000430570 SLC15A2Q16348 729 aa32.95■■■□□ 2.86
CPNE1-212ENST00000430570 STK32BQ9NY57 414 aa32.95■■■□□ 2.86
CPNE1-212ENST00000430570 ZNF831Q5JPB2 1677 aa32.93■■■□□ 2.86
CPNE1-212ENST00000430570 DNAJC10Q8IXB1 793 aa32.92■■■□□ 2.86
CPNE1-212ENST00000430570 CCDC27Q2M243 656 aa32.91■■■□□ 2.86
CPNE1-212ENST00000430570 TJP1Q07157 1748 aa32.91■■■□□ 2.86
CPNE1-212ENST00000430570 KDM3BQ7LBC6 1761 aa32.9■■■□□ 2.86
CPNE1-212ENST00000430570 WWC1Q8IX03 1113 aa32.9■■■□□ 2.86
CPNE1-212ENST00000430570 FMNL2Q96PY5 1086 aa32.9■■■□□ 2.86
CPNE1-212ENST00000430570 TSPYL4Q9UJ04 414 aa32.9■■■□□ 2.86
CPNE1-212ENST00000430570 HEG1Q9ULI3 1381 aa32.9■■■□□ 2.86
CPNE1-212ENST00000430570 C4BP0C0L5 1744 aa32.89■■■□□ 2.86
CPNE1-212ENST00000430570 NCBP3Q53F19 620 aaKnown RBP32.89■■■□□ 2.86
CPNE1-212ENST00000430570 VSIG10Q8N0Z9 540 aa32.89■■■□□ 2.86
CPNE1-212ENST00000430570 LAS1LQ9Y4W2 734 aaKnown RBP32.89■■■□□ 2.86
CPNE1-212ENST00000430570 CHL1O00533 1208 aa32.87■■■□□ 2.85
CPNE1-212ENST00000430570 COL5A3P25940 1745 aaPredicted RBP32.87■■■□□ 2.85
CPNE1-212ENST00000430570 BABAM1Q9NWV8 329 aa32.86■■■□□ 2.85
CPNE1-212ENST00000430570 CICQ96RK0 1608 aaPredicted RBP32.86■■■□□ 2.85
CPNE1-212ENST00000430570 PRAMEF22A3QJZ6 481 aa32.85■■■□□ 2.85
CPNE1-212ENST00000430570 EIF4A1P60842 406 aaKnown RBP32.85■■■□□ 2.85
CPNE1-212ENST00000430570 SMIM5Q71RC9 77 aa32.85■■■□□ 2.85
CPNE1-212ENST00000430570 PDGFDQ9GZP0 370 aaPredicted RBP32.85■■■□□ 2.85
CPNE1-212ENST00000430570 TFCP2L1Q9NZI6 479 aa32.85■■■□□ 2.85
CPNE1-212ENST00000430570 HMGB2P26583 209 aaKnown RBP32.84■■■□□ 2.85
CPNE1-212ENST00000430570 AMIGO3Q86WK7 504 aa32.84■■■□□ 2.85
CPNE1-212ENST00000430570 ZNF853P0CG23 659 aa32.83■■■□□ 2.85
CPNE1-212ENST00000430570 CYP19A1P11511 503 aaPredicted RBP32.83■■■□□ 2.85
CPNE1-212ENST00000430570 AK7Q96M32 723 aa32.83■■■□□ 2.85
CPNE1-212ENST00000430570 CFAP44Q96MT7 982 aa32.83■■■□□ 2.85
CPNE1-212ENST00000430570 TUBGCP6Q96RT7 1819 aa32.83■■■□□ 2.85
CPNE1-212ENST00000430570 MYH14Q7Z406 1995 aaKnown RBP32.82■■■□□ 2.84
CPNE1-212ENST00000430570 CNTNAP4Q9C0A0 1308 aa32.82■■■□□ 2.84
CPNE1-212ENST00000430570 CRKLP46109 303 aaKnown RBP32.81■■■□□ 2.84
CPNE1-212ENST00000430570 CALD1Q05682 793 aaKnown RBP32.81■■■□□ 2.84
CPNE1-212ENST00000430570 RC3H1Q5TC82 1133 aaKnown RBP32.81■■■□□ 2.84
CPNE1-212ENST00000430570 PNPLA7Q6ZV29 1317 aa32.81■■■□□ 2.84
CPNE1-212ENST00000430570 SNRPA1P09661 255 aaKnown RBP32.8■■■□□ 2.84
CPNE1-212ENST00000430570 INTS5Q6P9B9 1019 aaKnown RBP32.8■■■□□ 2.84
CPNE1-212ENST00000430570 IFT57Q9NWB7 429 aa32.8■■■□□ 2.84
CPNE1-212ENST00000430570 USP16Q9Y5T5 823 aa32.8■■■□□ 2.84
CPNE1-212ENST00000430570 GNPATO15228 680 aa32.79■■■□□ 2.84
CPNE1-212ENST00000430570 MBIPQ9NS73 344 aa32.79■■■□□ 2.84
CPNE1-212ENST00000430570 GIGYF1O75420 1035 aaPredicted RBP32.77■■■□□ 2.84
CPNE1-212ENST00000430570 GNAI1P63096 354 aa32.77■■■□□ 2.84
CPNE1-212ENST00000430570 NGEFQ8N5V2 710 aa32.77■■■□□ 2.84
CPNE1-212ENST00000430570 TEX13AQ9BXU3 409 aaPredicted RBP32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms