RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 ATG3Q9NT62 314 aa26.52■■□□□ 1.84
CSNK1E-207ENST00000430335 ASAP1Q9ULH1 1129 aa26.52■■□□□ 1.84
CSNK1E-207ENST00000430335 TMPOP42166 694 aaKnown RBP26.51■■□□□ 1.83
CSNK1E-207ENST00000430335 CCER2I3L3R5 266 aa26.5■■□□□ 1.83
CSNK1E-207ENST00000430335 TEFQ10587 303 aa26.5■■□□□ 1.83
CSNK1E-207ENST00000430335 LY75O60449 1722 aa26.49■■□□□ 1.83
CSNK1E-207ENST00000430335 RIPK4P57078 832 aa26.48■■□□□ 1.83
CSNK1E-207ENST00000430335 MCM10Q7L590 875 aa26.48■■□□□ 1.83
CSNK1E-207ENST00000430335 LRRC4BQ9NT99 713 aa26.48■■□□□ 1.83
CSNK1E-207ENST00000430335 NUP188Q5SRE5 1749 aa26.48■■□□□ 1.83
CSNK1E-207ENST00000430335 CCNL1Q9UK58 526 aaPredicted RBP26.47■■□□□ 1.83
CSNK1E-207ENST00000430335 VIRMAQ69YN4 1812 aaKnown RBP26.46■■□□□ 1.83
CSNK1E-207ENST00000430335 LMOD3Q0VAK6 560 aa26.46■■□□□ 1.83
CSNK1E-207ENST00000430335 DCTN1Q14203 1278 aa26.46■■□□□ 1.83
CSNK1E-207ENST00000430335 NBPF14Q5TI25 921 aa26.46■■□□□ 1.83
CSNK1E-207ENST00000430335 LOC102724428A0A0B4J2F2 783 aa26.45■■□□□ 1.82
CSNK1E-207ENST00000430335 HMGB2P26583 209 aaKnown RBP26.45■■□□□ 1.82
CSNK1E-207ENST00000430335 SIK1P57059 783 aa26.45■■□□□ 1.82
CSNK1E-207ENST00000430335 DLG5Q8TDM6 1919 aa26.44■■□□□ 1.82
CSNK1E-207ENST00000430335 RRP7AQ9Y3A4 280 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-207ENST00000430335 APAF1O14727 1248 aa26.42■■□□□ 1.82
CSNK1E-207ENST00000430335 SIPA1L3O60292 1781 aaPredicted RBP26.41■■□□□ 1.82
CSNK1E-207ENST00000430335 PAPPAQ13219 1627 aa26.41■■□□□ 1.82
CSNK1E-207ENST00000430335 KCNQ4P56696 695 aa26.41■■□□□ 1.82
CSNK1E-207ENST00000430335 ANO8Q9HCE9 1232 aaPredicted RBP26.41■■□□□ 1.82
CSNK1E-207ENST00000430335 SLC39A6Q13433 755 aa26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 TAF7Q15545 349 aaPredicted RBP26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 NEUROD2Q15784 382 aa26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 FAM9BQ8IZU0 186 aa26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 RBM42Q9BTD8 480 aaKnown RBP26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
CSNK1E-207ENST00000430335 BTBD11A6QL63 1104 aa26.39■■□□□ 1.82
CSNK1E-207ENST00000430335 MIER1Q8N108 512 aa26.39■■□□□ 1.82
CSNK1E-207ENST00000430335 SLC4A9Q96Q91 983 aa26.39■■□□□ 1.82
CSNK1E-207ENST00000430335 PTCD1O75127 700 aaKnown RBP26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 ATP6V1AP38606 617 aa26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 ZNF790Q6PG37 636 aa26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 TTC5Q8N0Z6 440 aa26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 THUMPD2Q9BTF0 503 aaKnown RBP26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 ZNF831Q5JPB2 1677 aa26.38■■□□□ 1.81
CSNK1E-207ENST00000430335 SLC15A2Q16348 729 aa26.37■■□□□ 1.81
CSNK1E-207ENST00000430335 NCBP3Q53F19 620 aaKnown RBP26.37■■□□□ 1.81
CSNK1E-207ENST00000430335 AKT1S1Q96B36 256 aa26.37■■□□□ 1.81
CSNK1E-207ENST00000430335 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
CSNK1E-207ENST00000430335 ITPK1Q13572 414 aa26.36■■□□□ 1.81
CSNK1E-207ENST00000430335 R3HDM1Q15032 1099 aaKnown RBP26.35■■□□□ 1.81
CSNK1E-207ENST00000430335 ZNF827Q17R98 1081 aa26.34■■□□□ 1.81
CSNK1E-207ENST00000430335 VSIG10Q8N0Z9 540 aa26.34■■□□□ 1.81
CSNK1E-207ENST00000430335 BABAM1Q9NWV8 329 aa26.33■■□□□ 1.81
CSNK1E-207ENST00000430335 C5P01031 1676 aa26.32■■□□□ 1.8
CSNK1E-207ENST00000430335 CCDC27Q2M243 656 aa26.32■■□□□ 1.8
CSNK1E-207ENST00000430335 LINC00116Q8NCU8 138 aa26.32■■□□□ 1.8
CSNK1E-207ENST00000430335 ZNF496Q96IT1 587 aaPredicted RBP26.32■■□□□ 1.8
CSNK1E-207ENST00000430335 UBR2Q8IWV8 1755 aa26.32■■□□□ 1.8
CSNK1E-207ENST00000430335 PSDA5PKW4 1024 aaPredicted RBP26.31■■□□□ 1.8
CSNK1E-207ENST00000430335 KCNQ3O43525 872 aa26.31■■□□□ 1.8
CSNK1E-207ENST00000430335 FMNL2Q96PY5 1086 aa26.31■■□□□ 1.8
CSNK1E-207ENST00000430335 CICQ96RK0 1608 aaPredicted RBP26.31■■□□□ 1.8
CSNK1E-207ENST00000430335 TAF1LQ8IZX4 1826 aa26.3■■□□□ 1.8
CSNK1E-207ENST00000430335 MIS18AQ9NYP9 233 aa26.29■■□□□ 1.8
CSNK1E-207ENST00000430335 HEG1Q9ULI3 1381 aa26.29■■□□□ 1.8
CSNK1E-207ENST00000430335 C4BP0C0L5 1744 aa26.28■■□□□ 1.8
CSNK1E-207ENST00000430335 RC3H1Q5TC82 1133 aaKnown RBP26.28■■□□□ 1.8
CSNK1E-207ENST00000430335 NGEFQ8N5V2 710 aa26.28■■□□□ 1.8
CSNK1E-207ENST00000430335 CALD1Q05682 793 aaKnown RBP26.27■■□□□ 1.8
CSNK1E-207ENST00000430335 DNAJC10Q8IXB1 793 aa26.27■■□□□ 1.8
CSNK1E-207ENST00000430335 AK7Q96M32 723 aa26.27■■□□□ 1.8
CSNK1E-207ENST00000430335 TFCP2L1Q9NZI6 479 aa26.27■■□□□ 1.8
CSNK1E-207ENST00000430335 CNTNAP4Q9C0A0 1308 aa26.27■■□□□ 1.8
CSNK1E-207ENST00000430335 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
CSNK1E-207ENST00000430335 TSPYL4Q9UJ04 414 aa26.26■■□□□ 1.79
CSNK1E-207ENST00000430335 TJP1Q07157 1748 aa26.25■■□□□ 1.79
CSNK1E-207ENST00000430335 CHL1O00533 1208 aa26.25■■□□□ 1.79
CSNK1E-207ENST00000430335 WWC1Q8IX03 1113 aa26.24■■□□□ 1.79
CSNK1E-207ENST00000430335 CFAP44Q96MT7 982 aa26.24■■□□□ 1.79
CSNK1E-207ENST00000430335 KDM3BQ7LBC6 1761 aa26.24■■□□□ 1.79
CSNK1E-207ENST00000430335 COL5A3P25940 1745 aaPredicted RBP26.24■■□□□ 1.79
CSNK1E-207ENST00000430335 PNPLA7Q6ZV29 1317 aa26.23■■□□□ 1.79
CSNK1E-207ENST00000430335 CYP19A1P11511 503 aaPredicted RBP26.23■■□□□ 1.79
CSNK1E-207ENST00000430335 EIF4A1P60842 406 aaKnown RBP26.23■■□□□ 1.79
CSNK1E-207ENST00000430335 STARD3NLO95772 234 aa26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 SNRPA1P09661 255 aaKnown RBP26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 CRKLP46109 303 aaKnown RBP26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 FLAD1Q8NFF5 587 aa26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 IFT57Q9NWB7 429 aa26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 QSER1Q2KHR3 1735 aa26.22■■□□□ 1.79
CSNK1E-207ENST00000430335 GNPATO15228 680 aa26.21■■□□□ 1.79
CSNK1E-207ENST00000430335 ZNF853P0CG23 659 aa26.21■■□□□ 1.79
CSNK1E-207ENST00000430335 SSFA2P28290 1259 aa26.21■■□□□ 1.79
CSNK1E-207ENST00000430335 SENP3-EIF4A1A0A087X0R7 540 aa26.2■■□□□ 1.78
CSNK1E-207ENST00000430335 INTS5Q6P9B9 1019 aaKnown RBP26.2■■□□□ 1.78
CSNK1E-207ENST00000430335 RPS6KA4O75676 772 aa26.19■■□□□ 1.78
CSNK1E-207ENST00000430335 GNAI1P63096 354 aa26.19■■□□□ 1.78
CSNK1E-207ENST00000430335 CCDC87Q9NVE4 849 aa26.19■■□□□ 1.78
CSNK1E-207ENST00000430335 RTCBQ9Y3I0 505 aaKnown RBP26.19■■□□□ 1.78
CSNK1E-207ENST00000430335 LAS1LQ9Y4W2 734 aaKnown RBP26.19■■□□□ 1.78
CSNK1E-207ENST00000430335 IL16Q14005 1332 aa26.18■■□□□ 1.78
CSNK1E-207ENST00000430335 AMIGO3Q86WK7 504 aa26.18■■□□□ 1.78
CSNK1E-207ENST00000430335 PDGFDQ9GZP0 370 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms