RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 IFIT5Q13325 482 aaKnown RBP7□□□□□ -1.29
UBR3-204ENST00000430321 MVPQ14764 893 aaKnown RBP7□□□□□ -1.29
UBR3-204ENST00000430321 ZCRB1Q8TBF4 217 aaKnown RBP7□□□□□ -1.29
UBR3-204ENST00000430321 C14orf93Q9H972 538 aaKnown RBP7□□□□□ -1.29
UBR3-204ENST00000430321 DNAJC5BQ9UF47 199 aa7□□□□□ -1.29
UBR3-204ENST00000430321 PNMA2Q9UL42 364 aa7□□□□□ -1.29
UBR3-204ENST00000430321 NSD3Q9BZ95 1437 aa7□□□□□ -1.29
UBR3-204ENST00000430321 PCDH11XQ9BZA7 1347 aa7□□□□□ -1.29
UBR3-204ENST00000430321 PCDH11YQ9BZA8 1340 aa7□□□□□ -1.29
UBR3-204ENST00000430321 PDE3AQ14432 1141 aa7□□□□□ -1.29
UBR3-204ENST00000430321 CLUAP1Q96AJ1 413 aa7□□□□□ -1.29
UBR3-204ENST00000430321 METTL24Q5JXM2 366 aa7□□□□□ -1.29
UBR3-204ENST00000430321 CREBRFQ8IUR6 639 aa7□□□□□ -1.29
UBR3-204ENST00000430321 ELL2O00472 640 aaPredicted RBP7□□□□□ -1.29
UBR3-204ENST00000430321 TDO2P48775 406 aa7□□□□□ -1.29
UBR3-204ENST00000430321 ZC3H6P61129 1189 aaKnown RBP7□□□□□ -1.29
UBR3-204ENST00000430321 PIK3C2GO75747 1445 aa7□□□□□ -1.29
UBR3-204ENST00000430321 NAIPQ13075 1403 aa7□□□□□ -1.29
UBR3-204ENST00000430321 BAG4O95429 457 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 IL2RBP14784 551 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 PPP2R1AP30153 589 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 TNNT3P45378 269 aaPredicted RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 RRP1P56182 461 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 ZRSR2Q15696 482 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 ALDH1L2Q3SY69 923 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 SETDB2Q96T68 719 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 DBF4Q9UBU7 674 aaPredicted RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 CETN2P41208 172 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 IMMTQ16891 758 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 AIDAQ96BJ3 306 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 GTPBP4Q9BZE4 634 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 FAM13BQ9NYF5 915 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 RTCBQ9Y3I0 505 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 LRRC45Q96CN5 670 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 PTPRCP08575 1304 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 SAMD1Q6SPF0 538 aaPredicted RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 NAP1L4Q99733 375 aaKnown RBP6.99□□□□□ -1.29
UBR3-204ENST00000430321 ZFYVE9O95405 1425 aa6.99□□□□□ -1.29
UBR3-204ENST00000430321 FGFR1OPO95684 399 aaKnown RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 ATP2B2Q01814 1243 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 TRMT112Q9UI30 125 aaKnown RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 CLEC11AQ9Y240 323 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 FAM177BA6PVY3 158 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 NBPF6Q5VWK0 638 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 SASS6Q6UVJ0 657 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 NBPF5PQ86XG9 351 aaPredicted RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 NBPF4Q96M43 638 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 ABCC5O15440 1437 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 NEBLO76041 1014 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 KIF5BP33176 963 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 ZNF444Q8N0Y2 327 aaPredicted RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 DRC1Q96MC2 740 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 BABAM1Q9NWV8 329 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 NBR1Q14596 966 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 TMEM266Q2M3C6 531 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 TPTE2Q6XPS3 522 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 SIRT1Q96EB6 747 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 EIF6P56537 245 aaKnown RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 BICD2Q8TD16 824 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 NECTIN2Q92692 538 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 C8orf37Q96NL8 207 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 CWC25Q9NXE8 425 aaPredicted RBP6.98□□□□□ -1.29
UBR3-204ENST00000430321 SLC5A4Q9NY91 659 aa6.98□□□□□ -1.29
UBR3-204ENST00000430321 PDE4BQ07343 736 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 TCP11L2Q8N4U5 519 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 ANKRD24Q8TF21 1146 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 ZNF622Q969S3 477 aaKnown RBP eCLIP6.97□□□□□ -1.297e-7■■■□□ 15.7
UBR3-204ENST00000430321 SCLT1Q96NL6 688 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 SLKQ9H2G2 1235 aaPredicted RBP6.97□□□□□ -1.29
UBR3-204ENST00000430321 U3KPZ7 1027 aaPredicted RBP6.97□□□□□ -1.29
UBR3-204ENST00000430321 ZMYM3Q14202 1370 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 KIF22Q14807 665 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 PARP10Q53GL7 1025 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 USP37Q86T82 979 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 NLRP3Q96P20 1036 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 IL16Q14005 1332 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 PBRM1Q86U86 1689 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 PIK3R4Q99570 1358 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 SLC4A2P04920 1241 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 IQCA1Q86XH1 822 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 MKNK2Q9HBH9 465 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 RALGAPBQ86X10 1494 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 PLEKHH1Q9ULM0 1364 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 NOS1P29475 1434 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 C6orf229H3BNL8 230 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 ERLIN2O94905 339 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 NCBP1Q09161 790 aaKnown RBP6.97□□□□□ -1.29
UBR3-204ENST00000430321 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 BICDL1Q6ZP65 573 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 FEZ1Q99689 392 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
UBR3-204ENST00000430321 ZNHIT6Q9NWK9 470 aaKnown RBP6.97□□□□□ -1.29
UBR3-204ENST00000430321 GPATCH8Q9UKJ3 1502 aaKnown RBP6.97□□□□□ -1.29
UBR3-204ENST00000430321 ATP10BO94823 1461 aa6.96□□□□□ -1.29
UBR3-204ENST00000430321 CRNKL1Q9BZJ0 848 aaKnown RBP6.96□□□□□ -1.29
UBR3-204ENST00000430321 PDCL3Q9H2J4 239 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms