RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 NALCNQ8IZF0 1738 aa18.4■□□□□ 0.54
LINC00839-202ENST00000429940 PRPF40AO75400 957 aaKnown RBP18.39■□□□□ 0.54
LINC00839-202ENST00000429940 SLC4A2P04920 1241 aa18.39■□□□□ 0.54
LINC00839-202ENST00000429940 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
LINC00839-202ENST00000429940 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
LINC00839-202ENST00000429940 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
LINC00839-202ENST00000429940 TPM2P07951 284 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 ACEP12821 1306 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 PDE1AP54750 535 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 GLIPR1L2Q4G1C9 344 aa18.37■□□□□ 0.53
LINC00839-202ENST00000429940 CRB1P82279 1406 aa18.36■□□□□ 0.53
LINC00839-202ENST00000429940 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
LINC00839-202ENST00000429940 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
LINC00839-202ENST00000429940 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
LINC00839-202ENST00000429940 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
LINC00839-202ENST00000429940 TTC21BQ7Z4L5 1316 aa18.35■□□□□ 0.53
LINC00839-202ENST00000429940 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
LINC00839-202ENST00000429940 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
LINC00839-202ENST00000429940 PEAK1Q9H792 1746 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 F6X3S4 739 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 NEK4P51957 841 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 KIAA1211Q6ZU35 1233 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 G2E3Q7L622 706 aa18.34■□□□□ 0.53
LINC00839-202ENST00000429940 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
LINC00839-202ENST00000429940 NWD1Q149M9 1564 aa18.33■□□□□ 0.53
LINC00839-202ENST00000429940 OVOS2A0A0J9YW53 1432 aa18.33■□□□□ 0.53
LINC00839-202ENST00000429940 OVOS2Q6IE36 1432 aa18.33■□□□□ 0.53
LINC00839-202ENST00000429940 HS1BP3Q53T59 392 aa18.33■□□□□ 0.53
LINC00839-202ENST00000429940 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 OFD1O75665 1012 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 NGDNQ8NEJ9 315 aaKnown RBP18.32■□□□□ 0.52
LINC00839-202ENST00000429940 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 GNAI2P04899 355 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
LINC00839-202ENST00000429940 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
LINC00839-202ENST00000429940 PDLIM2Q96JY6 352 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 EXOC6BQ9Y2D4 811 aa18.32■□□□□ 0.52
LINC00839-202ENST00000429940 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
LINC00839-202ENST00000429940 TSHZ3Q63HK5 1081 aa18.31■□□□□ 0.52
LINC00839-202ENST00000429940 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
LINC00839-202ENST00000429940 MCM2P49736 904 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.3■□□□□ 0.52
LINC00839-202ENST00000429940 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
LINC00839-202ENST00000429940 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 TOPAZ1Q8N9V7 1692 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 FMN2Q9NZ56 1722 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 FOXO3O43524 673 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 MCCP23508 829 aa18.3■□□□□ 0.52
LINC00839-202ENST00000429940 SYCE3A1L190 88 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 SALL3Q9BXA9 1300 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
LINC00839-202ENST00000429940 SOX12O15370 315 aa18.29■□□□□ 0.52
LINC00839-202ENST00000429940 NSFL1CQ9UNZ2 370 aaKnown RBP18.29■□□□□ 0.52
LINC00839-202ENST00000429940 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
LINC00839-202ENST00000429940 MAP3K19Q56UN5 1328 aa18.28■□□□□ 0.52
LINC00839-202ENST00000429940 MBD3O95983 291 aa18.28■□□□□ 0.52
LINC00839-202ENST00000429940 MX1P20591 662 aa18.28■□□□□ 0.52
LINC00839-202ENST00000429940 MTHFSDQ2M296 383 aaKnown RBP18.28■□□□□ 0.52
LINC00839-202ENST00000429940 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
LINC00839-202ENST00000429940 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
LINC00839-202ENST00000429940 USP6P35125 1406 aa18.27■□□□□ 0.52
LINC00839-202ENST00000429940 CUL4AQ13619 759 aa18.27■□□□□ 0.52
LINC00839-202ENST00000429940 PALD1Q9ULE6 856 aa18.27■□□□□ 0.52
LINC00839-202ENST00000429940 BRD1O95696 1058 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 NUTM2GQ5VZR2 741 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 ANO2Q9NQ90 1003 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 USP31Q70CQ4 1352 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 TRIM6-TRIM34B2RNG4 842 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 ANAPC15P60006 121 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
LINC00839-202ENST00000429940 ZNF500O60304 480 aaPredicted RBP18.25■□□□□ 0.51
LINC00839-202ENST00000429940 GNAI3P08754 354 aa18.25■□□□□ 0.51
LINC00839-202ENST00000429940 CHMLP26374 656 aa18.25■□□□□ 0.51
LINC00839-202ENST00000429940 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.25■□□□□ 0.51
LINC00839-202ENST00000429940 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
LINC00839-202ENST00000429940 XIRP1Q702N8 1843 aaKnown RBP18.25■□□□□ 0.51
LINC00839-202ENST00000429940 PNMA6EA0A0J9YXQ4 647 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 ATF3P18847 181 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
LINC00839-202ENST00000429940 INTS4Q96HW7 963 aaKnown RBP18.24■□□□□ 0.51
LINC00839-202ENST00000429940 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 TERF1P54274 439 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
LINC00839-202ENST00000429940 FKBP5Q13451 457 aaPredicted RBP18.24■□□□□ 0.51
LINC00839-202ENST00000429940 ANKARQ7Z5J8 1434 aa18.23■□□□□ 0.51
LINC00839-202ENST00000429940 FLIIQ13045 1269 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms