RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 RTL1A6NKG5 1358 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 CCDC30Q5VVM6 783 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 CHPF2Q9P2E5 772 aa12.68□□□□□ -0.38
RPE-206ENST00000429921 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
RPE-206ENST00000429921 PIP4K2AP48426 406 aaPredicted RBP12.67□□□□□ -0.38
RPE-206ENST00000429921 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
RPE-206ENST00000429921 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
RPE-206ENST00000429921 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
RPE-206ENST00000429921 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
RPE-206ENST00000429921 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
RPE-206ENST00000429921 PTPRCP08575 1304 aa12.66□□□□□ -0.38
RPE-206ENST00000429921 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
RPE-206ENST00000429921 PROSER3Q2NL68 480 aa12.66□□□□□ -0.38
RPE-206ENST00000429921 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
RPE-206ENST00000429921 ANKRD44Q8N8A2 993 aa12.65□□□□□ -0.38
RPE-206ENST00000429921 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
RPE-206ENST00000429921 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
RPE-206ENST00000429921 TRPM3Q9HCF6 1732 aaPredicted RBP12.65□□□□□ -0.38
RPE-206ENST00000429921 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
RPE-206ENST00000429921 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
RPE-206ENST00000429921 ERBB3P21860 1342 aa12.65□□□□□ -0.38
RPE-206ENST00000429921 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
RPE-206ENST00000429921 AIMP1Q12904 312 aaKnown RBP12.64□□□□□ -0.39
RPE-206ENST00000429921 BRINP3Q76B58 766 aa12.64□□□□□ -0.39
RPE-206ENST00000429921 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
RPE-206ENST00000429921 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
RPE-206ENST00000429921 LRRFIP2Q9Y608 721 aaKnown RBP12.64□□□□□ -0.39
RPE-206ENST00000429921 USP54Q70EL1 1684 aa12.64□□□□□ -0.39
RPE-206ENST00000429921 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
RPE-206ENST00000429921 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 C22orf23Q9BZE7 217 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 CHMP4BQ9H444 224 aaKnown RBP12.63□□□□□ -0.39
RPE-206ENST00000429921 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
RPE-206ENST00000429921 CAPN15O75808 1086 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
RPE-206ENST00000429921 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 CEMIPQ8WUJ3 1361 aa12.63□□□□□ -0.39
RPE-206ENST00000429921 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
RPE-206ENST00000429921 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
RPE-206ENST00000429921 SLIT3O75094 1523 aa12.62□□□□□ -0.39
RPE-206ENST00000429921 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
RPE-206ENST00000429921 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
RPE-206ENST00000429921 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
RPE-206ENST00000429921 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 MYL6BP14649 208 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 AMOTQ4VCS5 1084 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 GNAI2P04899 355 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
RPE-206ENST00000429921 USP44Q9H0E7 712 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 SLAIN2Q9P270 581 aa12.61□□□□□ -0.39
RPE-206ENST00000429921 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
RPE-206ENST00000429921 TBC1D9Q6ZT07 1266 aa12.6□□□□□ -0.39
RPE-206ENST00000429921 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
RPE-206ENST00000429921 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
RPE-206ENST00000429921 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
RPE-206ENST00000429921 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
RPE-206ENST00000429921 IL1RAPL2Q9NP60 686 aa12.59□□□□□ -0.39
RPE-206ENST00000429921 MEGF6O75095 1541 aa12.59□□□□□ -0.39
RPE-206ENST00000429921 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
RPE-206ENST00000429921 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
RPE-206ENST00000429921 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
RPE-206ENST00000429921 ALS2Q96Q42 1657 aa12.58□□□□□ -0.39
RPE-206ENST00000429921 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.39
RPE-206ENST00000429921 ZBTB22O15209 634 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 CYP27B1O15528 508 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
RPE-206ENST00000429921 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
RPE-206ENST00000429921 UBTFL1P0CB47 393 aaPredicted RBP12.58□□□□□ -0.4
RPE-206ENST00000429921 PHKG2P15735 406 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 MAP3K2Q9Y2U5 619 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
RPE-206ENST00000429921 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
RPE-206ENST00000429921 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
RPE-206ENST00000429921 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
RPE-206ENST00000429921 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
RPE-206ENST00000429921 MAP4K4O95819 1239 aaPredicted RBP12.57□□□□□ -0.4
RPE-206ENST00000429921 SRCIN1Q9C0H9 1055 aa12.57□□□□□ -0.4
RPE-206ENST00000429921 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 FRAT2O75474 233 aaPredicted RBP12.56□□□□□ -0.4
RPE-206ENST00000429921 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 SDSP20132 328 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 PPP1R42Q7Z4L9 355 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 DNAAF4Q8WXU2 420 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
RPE-206ENST00000429921 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
RPE-206ENST00000429921 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
RPE-206ENST00000429921 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
RPE-206ENST00000429921 ADCY9O60503 1353 aa12.55□□□□□ -0.4
RPE-206ENST00000429921 HMMRO75330 724 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms