RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ARHGEF40Q8TER5 1519 aa13.33□□□□□ -0.28
SEMA4D-209ENST00000429836 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 FAM135BQ49AJ0 1406 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 MSH6P52701 1360 aa13.32□□□□□ -0.28
SEMA4D-209ENST00000429836 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 MCCP23508 829 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 RTL1A6NKG5 1358 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 CDK11BP21127 795 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 UBE2HP62256 183 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
SEMA4D-209ENST00000429836 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 CHMP3Q9Y3E7 222 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 RGS12O14924 1447 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 ERICH4A6NGS2 130 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 CCDC186Q7Z3E2 898 aa13.3□□□□□ -0.28
SEMA4D-209ENST00000429836 GOLGA6L6A8MZA4 724 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 TNNT1P13805 278 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 GGT6Q6P531 493 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 IL25Q9H293 177 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 MINK1Q8N4C8 1332 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 YEATS2Q9ULM3 1422 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
SEMA4D-209ENST00000429836 TPM3P06753 285 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 SMTNL1A8MU46 457 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 SYT1P21579 422 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 CHMLP26374 656 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 TERF2Q15554 542 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 ADGRB3O60242 1522 aa13.28□□□□□ -0.28
SEMA4D-209ENST00000429836 DNM1Q05193 864 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 UNC5CLQ8IV45 518 aa13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 IPO4Q8TEX9 1081 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 ST7Q9NRC1 585 aa13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 POLKQ9UBT6 870 aa13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 MORC2Q9Y6X9 1032 aaPredicted RBP13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 GLI2P10070 1586 aa13.27□□□□□ -0.28
SEMA4D-209ENST00000429836 STX6O43752 255 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 CAMK4Q16566 473 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC112Q8NEF3 446 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 ABCA9Q8IUA7 1624 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
SEMA4D-209ENST00000429836 MROH1Q8NDA8 1641 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 F13A1P00488 732 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 ANAPC15P60006 121 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
SEMA4D-209ENST00000429836 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 PPLO60437 1756 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 SLC4A10Q6U841 1118 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 EMILIN1Q9Y6C2 1016 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
SEMA4D-209ENST00000429836 CPA1P15085 419 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 SYCP1Q15431 976 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 KRT222Q8N1A0 295 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 F6X3S4 739 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 MAP4K4O95819 1239 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
SEMA4D-209ENST00000429836 HMMRO75330 724 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 AK2P54819 239 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 FAM200AQ8TCP9 573 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 SMC3Q9UQE7 1217 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 DIP2BQ9P265 1576 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 CCDC66A2RUB6 948 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 LARGE1O95461 756 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 TIGD1Q96MW7 591 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 CABP1Q9NZU7 370 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
SEMA4D-209ENST00000429836 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-209ENST00000429836 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms