RNA–Protein interactions for RNA: ENST00000429744.2

PDCL3P6-201, Transcript of phosducin-like 3 pseudogene 6, humanhuman

BASIC

Gene PDCL3P6, Length 706 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P6-201ENST00000429744 BTBD11A6QL63 1104 aa12.22□□□□□ -0.45
PDCL3P6-201ENST00000429744 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
PDCL3P6-201ENST00000429744 EXOSC9Q06265 439 aaKnown RBP12.2□□□□□ -0.46
PDCL3P6-201ENST00000429744 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
PDCL3P6-201ENST00000429744 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
PDCL3P6-201ENST00000429744 SYTL4Q96C24 671 aaPredicted RBP12.19□□□□□ -0.46
PDCL3P6-201ENST00000429744 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
PDCL3P6-201ENST00000429744 CT47B1P0C2W7 299 aaPredicted RBP12.18□□□□□ -0.46
PDCL3P6-201ENST00000429744 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
PDCL3P6-201ENST00000429744 KRT27Q7Z3Y8 459 aa12.18□□□□□ -0.46
PDCL3P6-201ENST00000429744 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
PDCL3P6-201ENST00000429744 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
PDCL3P6-201ENST00000429744 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 WNK3Q9BYP7 1800 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 KCNQ3O43525 872 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 ZNF790Q6PG37 636 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 PIGBQ92521 554 aa12.17□□□□□ -0.46
PDCL3P6-201ENST00000429744 MRC1P22897 1456 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 TWISTNBQ3B726 338 aaPredicted RBP12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 FAM182BQ5T319 152 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 RCAN3Q9UKA8 241 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
PDCL3P6-201ENST00000429744 SHANK3Q9BYB0 1731 aa12.15□□□□□ -0.46
PDCL3P6-201ENST00000429744 VAMP4O75379 141 aa12.15□□□□□ -0.46
PDCL3P6-201ENST00000429744 BCL9O00512 1426 aa12.14□□□□□ -0.47
PDCL3P6-201ENST00000429744 KCNQ2O43526 872 aa12.14□□□□□ -0.47
PDCL3P6-201ENST00000429744 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
PDCL3P6-201ENST00000429744 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
PDCL3P6-201ENST00000429744 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
PDCL3P6-201ENST00000429744 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
PDCL3P6-201ENST00000429744 RGS12O14924 1447 aa12.13□□□□□ -0.47
PDCL3P6-201ENST00000429744 ZNF496Q96IT1 587 aaPredicted RBP12.13□□□□□ -0.47
PDCL3P6-201ENST00000429744 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
PDCL3P6-201ENST00000429744 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
PDCL3P6-201ENST00000429744 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
PDCL3P6-201ENST00000429744 HOXB7P09629 217 aa12.12□□□□□ -0.47
PDCL3P6-201ENST00000429744 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
PDCL3P6-201ENST00000429744 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 ALDH1L2Q3SY69 923 aa12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 SUPT16HQ9Y5B9 1047 aaKnown RBP12.11□□□□□ -0.47
PDCL3P6-201ENST00000429744 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 BCL2L13Q9BXK5 485 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
PDCL3P6-201ENST00000429744 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
PDCL3P6-201ENST00000429744 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
PDCL3P6-201ENST00000429744 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
PDCL3P6-201ENST00000429744 BCAR3O75815 825 aa12.09□□□□□ -0.47
PDCL3P6-201ENST00000429744 PTF1AQ7RTS3 328 aa12.09□□□□□ -0.47
PDCL3P6-201ENST00000429744 TRIM37O94972 964 aa12.08□□□□□ -0.48
PDCL3P6-201ENST00000429744 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
PDCL3P6-201ENST00000429744 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
PDCL3P6-201ENST00000429744 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
PDCL3P6-201ENST00000429744 STK31Q9BXU1 1019 aa12.08□□□□□ -0.48
PDCL3P6-201ENST00000429744 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
PDCL3P6-201ENST00000429744 RRP1P56182 461 aaKnown RBP12.07□□□□□ -0.48
PDCL3P6-201ENST00000429744 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
PDCL3P6-201ENST00000429744 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
PDCL3P6-201ENST00000429744 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
PDCL3P6-201ENST00000429744 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 ATP6V1AP38606 617 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 SIK1P57059 783 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
PDCL3P6-201ENST00000429744 STARD3NLO95772 234 aa12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 NOB1Q9ULX3 412 aaKnown RBP12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
PDCL3P6-201ENST00000429744 IPO8O15397 1037 aaKnown RBP12.04□□□□□ -0.48
PDCL3P6-201ENST00000429744 PLIN1O60240 522 aa12.04□□□□□ -0.48
PDCL3P6-201ENST00000429744 ZKSCAN2Q63HK3 967 aa12.04□□□□□ -0.48
PDCL3P6-201ENST00000429744 NEFLP07196 543 aa12.03□□□□□ -0.48
PDCL3P6-201ENST00000429744 DDX21Q9NR30 783 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDCL3P6-201ENST00000429744 ERBB4Q15303 1308 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms