RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 N4BP2Q86UW6 1770 aaPredicted RBP20.24■□□□□ 0.83
MBD4-203ENST00000429544 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
MBD4-203ENST00000429544 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
MBD4-203ENST00000429544 HDGFL1Q5TGJ6 251 aa20.24■□□□□ 0.83
MBD4-203ENST00000429544 DDX17Q92841 729 aaKnown RBP20.23■□□□□ 0.83
MBD4-203ENST00000429544 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
MBD4-203ENST00000429544 AMOTQ4VCS5 1084 aa20.22■□□□□ 0.83
MBD4-203ENST00000429544 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
MBD4-203ENST00000429544 TEFQ10587 303 aa20.21■□□□□ 0.83
MBD4-203ENST00000429544 USP35Q9P2H5 1018 aa20.21■□□□□ 0.83
MBD4-203ENST00000429544 DCCP43146 1447 aa20.21■□□□□ 0.83
MBD4-203ENST00000429544 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
MBD4-203ENST00000429544 C1orf141Q5JVX7 400 aa20.21■□□□□ 0.83
MBD4-203ENST00000429544 PLEKHM2Q8IWE5 1019 aa20.21■□□□□ 0.83
MBD4-203ENST00000429544 APBB1O00213 710 aa20.2■□□□□ 0.82
MBD4-203ENST00000429544 TBC1D2Q9BYX2 928 aa20.2■□□□□ 0.82
MBD4-203ENST00000429544 KCNQ3O43525 872 aa20.2■□□□□ 0.82
MBD4-203ENST00000429544 DEKP35659 375 aaKnown RBP20.2■□□□□ 0.82
MBD4-203ENST00000429544 NFKBIBQ15653 356 aa20.2■□□□□ 0.82
MBD4-203ENST00000429544 C16orf71Q8IYS4 520 aaPredicted RBP20.2■□□□□ 0.82
MBD4-203ENST00000429544 HMMRO75330 724 aa20.19■□□□□ 0.82
MBD4-203ENST00000429544 GNAI2P04899 355 aa20.19■□□□□ 0.82
MBD4-203ENST00000429544 HSPA2P54652 639 aa20.19■□□□□ 0.82
MBD4-203ENST00000429544 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
MBD4-203ENST00000429544 RNMTO43148 476 aaKnown RBP20.19■□□□□ 0.82
MBD4-203ENST00000429544 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
MBD4-203ENST00000429544 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
MBD4-203ENST00000429544 BTBD11A6QL63 1104 aa20.18■□□□□ 0.82
MBD4-203ENST00000429544 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
MBD4-203ENST00000429544 TBC1D9Q6ZT07 1266 aa20.18■□□□□ 0.82
MBD4-203ENST00000429544 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
MBD4-203ENST00000429544 ERBB3P21860 1342 aa20.18■□□□□ 0.82
MBD4-203ENST00000429544 OTUD7AQ8TE49 926 aaPredicted RBP20.17■□□□□ 0.82
MBD4-203ENST00000429544 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
MBD4-203ENST00000429544 GNAI3P08754 354 aa20.16■□□□□ 0.82
MBD4-203ENST00000429544 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
MBD4-203ENST00000429544 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
MBD4-203ENST00000429544 OVOS2A0A0G2JMS6 1433 aa20.16■□□□□ 0.82
MBD4-203ENST00000429544 CDC45O75419 566 aa20.15■□□□□ 0.82
MBD4-203ENST00000429544 HOXB7P09629 217 aa20.15■□□□□ 0.82
MBD4-203ENST00000429544 SIPA1L3O60292 1781 aaPredicted RBP20.15■□□□□ 0.82
MBD4-203ENST00000429544 RBM25P49756 843 aaKnown RBP20.15■□□□□ 0.82
MBD4-203ENST00000429544 CADPS2Q86UW7 1296 aa20.15■□□□□ 0.82
MBD4-203ENST00000429544 CHPF2Q9P2E5 772 aa20.15■□□□□ 0.82
MBD4-203ENST00000429544 XIRP1Q702N8 1843 aaKnown RBP20.14■□□□□ 0.81
MBD4-203ENST00000429544 COL18A1P39060 1754 aa20.14■□□□□ 0.81
MBD4-203ENST00000429544 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
MBD4-203ENST00000429544 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
MBD4-203ENST00000429544 TNS3Q68CZ2 1445 aa20.13■□□□□ 0.81
MBD4-203ENST00000429544 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
MBD4-203ENST00000429544 NLRP2Q9NX02 1062 aa20.12■□□□□ 0.81
MBD4-203ENST00000429544 LRRFIP2Q9Y608 721 aaKnown RBP20.12■□□□□ 0.81
MBD4-203ENST00000429544 EXOC6BQ9Y2D4 811 aa20.12■□□□□ 0.81
MBD4-203ENST00000429544 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
MBD4-203ENST00000429544 ANXA1P04083 346 aa20.11■□□□□ 0.81
MBD4-203ENST00000429544 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
MBD4-203ENST00000429544 ATP8B2P98198 1209 aa20.11■□□□□ 0.81
MBD4-203ENST00000429544 USP44Q9H0E7 712 aa20.11■□□□□ 0.81
MBD4-203ENST00000429544 RAPGEF4Q8WZA2 1011 aa20.1■□□□□ 0.81
MBD4-203ENST00000429544 CHMP4AQ9BY43 222 aa20.1■□□□□ 0.81
MBD4-203ENST00000429544 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
MBD4-203ENST00000429544 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
MBD4-203ENST00000429544 ANTXR1Q9H6X2 564 aa20.1■□□□□ 0.81
MBD4-203ENST00000429544 LMTK3Q96Q04 1460 aa20.09■□□□□ 0.81
MBD4-203ENST00000429544 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
MBD4-203ENST00000429544 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
MBD4-203ENST00000429544 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
MBD4-203ENST00000429544 SCN11AQ9UI33 1791 aa20.09■□□□□ 0.81
MBD4-203ENST00000429544 HSCBQ8IWL3 235 aa20.08■□□□□ 0.81
MBD4-203ENST00000429544 CSB-PGBD3P0DP91 1061 aa20.08■□□□□ 0.8
MBD4-203ENST00000429544 MEGF6O75095 1541 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 PI4KAP2A4QPH2 592 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
MBD4-203ENST00000429544 SDSP20132 328 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 PI4KAP1Q8N8J0 262 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 DNAAF4Q8WXU2 420 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
MBD4-203ENST00000429544 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
MBD4-203ENST00000429544 ADCY9O60503 1353 aa20.06■□□□□ 0.8
MBD4-203ENST00000429544 HEG1Q9ULI3 1381 aa20.06■□□□□ 0.8
MBD4-203ENST00000429544 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
MBD4-203ENST00000429544 LRRCC1Q9C099 1032 aa20.05■□□□□ 0.8
MBD4-203ENST00000429544 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
MBD4-203ENST00000429544 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
MBD4-203ENST00000429544 KIF2CQ99661 725 aa20.05■□□□□ 0.8
MBD4-203ENST00000429544 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
MBD4-203ENST00000429544 IBTKQ9P2D0 1353 aaPredicted RBP20.05■□□□□ 0.8
MBD4-203ENST00000429544 ABCC6O95255 1503 aa20.04■□□□□ 0.8
MBD4-203ENST00000429544 PDE1AP54750 535 aa20.04■□□□□ 0.8
MBD4-203ENST00000429544 BEND3Q5T5X7 828 aa20.04■□□□□ 0.8
MBD4-203ENST00000429544 PROSER3Q2NL68 480 aa20.04■□□□□ 0.8
MBD4-203ENST00000429544 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
MBD4-203ENST00000429544 TUBGCP6Q96RT7 1819 aa20.03■□□□□ 0.8
MBD4-203ENST00000429544 PHKG2P15735 406 aa20.03■□□□□ 0.8
MBD4-203ENST00000429544 OSBPL3Q9H4L5 887 aa20.03■□□□□ 0.8
MBD4-203ENST00000429544 C5P01031 1676 aa20.03■□□□□ 0.8
MBD4-203ENST00000429544 BRINP3Q76B58 766 aa20.02■□□□□ 0.8
MBD4-203ENST00000429544 SNX21Q969T3 373 aa20.02■□□□□ 0.8
MBD4-203ENST00000429544 TSHZ3Q63HK5 1081 aa20.02■□□□□ 0.8
MBD4-203ENST00000429544 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms