RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
NEDD1-203ENST00000429527 KCPQ6ZWJ8 1503 aa12.45□□□□□ -0.42
NEDD1-203ENST00000429527 C4AP0C0L4 1744 aa12.45□□□□□ -0.42
NEDD1-203ENST00000429527 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
NEDD1-203ENST00000429527 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
NEDD1-203ENST00000429527 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 KCNQ2O43526 872 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
NEDD1-203ENST00000429527 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 SLC15A2Q16348 729 aa12.43□□□□□ -0.42
NEDD1-203ENST00000429527 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
NEDD1-203ENST00000429527 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-203ENST00000429527 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
NEDD1-203ENST00000429527 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
NEDD1-203ENST00000429527 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-203ENST00000429527 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
NEDD1-203ENST00000429527 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
NEDD1-203ENST00000429527 USHBP1Q8N6Y0 703 aa12.41□□□□□ -0.42
NEDD1-203ENST00000429527 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
NEDD1-203ENST00000429527 PDE4AP27815 886 aa12.4□□□□□ -0.42
NEDD1-203ENST00000429527 MTHFSP49914 203 aa12.4□□□□□ -0.42
NEDD1-203ENST00000429527 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
NEDD1-203ENST00000429527 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
NEDD1-203ENST00000429527 PALLDQ8WX93 1383 aa12.4□□□□□ -0.42
NEDD1-203ENST00000429527 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
NEDD1-203ENST00000429527 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
NEDD1-203ENST00000429527 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
NEDD1-203ENST00000429527 AKAP4Q5JQC9 854 aa12.39□□□□□ -0.43
NEDD1-203ENST00000429527 DUSP27Q5VZP5 1158 aa12.39□□□□□ -0.43
NEDD1-203ENST00000429527 SCN7AQ01118 1682 aa12.39□□□□□ -0.43
NEDD1-203ENST00000429527 DIAPH1O60610 1272 aaKnown RBP12.38□□□□□ -0.43
NEDD1-203ENST00000429527 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
NEDD1-203ENST00000429527 AAMPQ13685 434 aa12.38□□□□□ -0.43
NEDD1-203ENST00000429527 R3HDM1Q15032 1099 aaKnown RBP12.38□□□□□ -0.43
NEDD1-203ENST00000429527 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
NEDD1-203ENST00000429527 PTGER2P43116 358 aa12.37□□□□□ -0.43
NEDD1-203ENST00000429527 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
NEDD1-203ENST00000429527 FLAD1Q8NFF5 587 aa12.37□□□□□ -0.43
NEDD1-203ENST00000429527 DDX54Q8TDD1 881 aaKnown RBP12.37□□□□□ -0.43
NEDD1-203ENST00000429527 PIGBQ92521 554 aa12.37□□□□□ -0.43
NEDD1-203ENST00000429527 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
NEDD1-203ENST00000429527 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
NEDD1-203ENST00000429527 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
NEDD1-203ENST00000429527 ZNF827Q17R98 1081 aa12.36□□□□□ -0.43
NEDD1-203ENST00000429527 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
NEDD1-203ENST00000429527 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
NEDD1-203ENST00000429527 MTFR1LQ9H019 292 aa12.36□□□□□ -0.43
NEDD1-203ENST00000429527 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
NEDD1-203ENST00000429527 DLEC1Q9Y238 1755 aa12.36□□□□□ -0.43
NEDD1-203ENST00000429527 PPM1GO15355 546 aaPredicted RBP12.35□□□□□ -0.43
NEDD1-203ENST00000429527 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
NEDD1-203ENST00000429527 MYH14Q7Z406 1995 aaKnown RBP12.35□□□□□ -0.43
NEDD1-203ENST00000429527 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
NEDD1-203ENST00000429527 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
NEDD1-203ENST00000429527 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
NEDD1-203ENST00000429527 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
NEDD1-203ENST00000429527 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
NEDD1-203ENST00000429527 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.43
NEDD1-203ENST00000429527 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
NEDD1-203ENST00000429527 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
NEDD1-203ENST00000429527 FCHSD2O94868 740 aa12.33□□□□□ -0.44
NEDD1-203ENST00000429527 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
NEDD1-203ENST00000429527 ADRA2BP18089 450 aa12.32□□□□□ -0.44
NEDD1-203ENST00000429527 SSFA2P28290 1259 aa12.32□□□□□ -0.44
NEDD1-203ENST00000429527 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
NEDD1-203ENST00000429527 RGL2O15211 777 aa12.32□□□□□ -0.44
NEDD1-203ENST00000429527 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-203ENST00000429527 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
NEDD1-203ENST00000429527 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-203ENST00000429527 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-203ENST00000429527 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
NEDD1-203ENST00000429527 CC2D1BQ5T0F9 858 aaKnown RBP12.31□□□□□ -0.44
NEDD1-203ENST00000429527 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
NEDD1-203ENST00000429527 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
NEDD1-203ENST00000429527 C8orf34Q49A92 452 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 SIK1P57059 783 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-203ENST00000429527 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
NEDD1-203ENST00000429527 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
NEDD1-203ENST00000429527 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
NEDD1-203ENST00000429527 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
NEDD1-203ENST00000429527 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
NEDD1-203ENST00000429527 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
NEDD1-203ENST00000429527 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
NEDD1-203ENST00000429527 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
NEDD1-203ENST00000429527 PDE3AQ14432 1141 aa12.28□□□□□ -0.44
NEDD1-203ENST00000429527 ITPK1Q13572 414 aa12.27□□□□□ -0.44
NEDD1-203ENST00000429527 CCDC27Q2M243 656 aa12.27□□□□□ -0.44
NEDD1-203ENST00000429527 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
NEDD1-203ENST00000429527 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
NEDD1-203ENST00000429527 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
NEDD1-203ENST00000429527 PNNQ9H307 717 aaKnown RBP12.27□□□□□ -0.45
NEDD1-203ENST00000429527 CHD4Q14839 1912 aa12.26□□□□□ -0.45
NEDD1-203ENST00000429527 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms