RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 ABCA6Q8N139 1617 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 MAP3K4Q9Y6R4 1608 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 LMTK2Q8IWU2 1503 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 KIF3CO14782 793 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 ZSCAN26Q16670 478 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 IQUBQ8NA54 791 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
CDC42BPA-206ENST00000429440 TTC36A6NLP5 189 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 KDM4AO75164 1064 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 SSR1P43307 286 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 TMF1P82094 1093 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 WDR43Q15061 677 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 CCDC191Q8NCU4 936 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 KIF1BO60333 1816 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 CCDC196A0A1B0GTZ2 297 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 FBXO38Q6PIJ6 1188 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 FBXO18Q8NFZ0 1043 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 GOLGA5Q8TBA6 731 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 LCMT1Q9UIC8 334 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 RRP15Q9Y3B9 282 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 MYOM2P54296 1465 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 KANK1Q14678 1352 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 SYNMO15061 1565 aa10.6□□□□□ -0.71
CDC42BPA-206ENST00000429440 ZKSCAN8Q15776 578 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 LRCH2Q5VUJ6 765 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 NSFL1CQ9UNZ2 370 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 PTPRCP08575 1304 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 NRXN1Q9ULB1 1477 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 MPNDQ8N594 471 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 ERO1AQ96HE7 468 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 LRRFIP2Q9Y608 721 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 POGZQ7Z3K3 1410 aa10.59□□□□□ -0.71
CDC42BPA-206ENST00000429440 TNNT1P13805 278 aa10.58□□□□□ -0.72
CDC42BPA-206ENST00000429440 DNAJC21Q5F1R6 531 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-206ENST00000429440 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDC42BPA-206ENST00000429440 NEK11Q8NG66 645 aa10.58□□□□□ -0.72
CDC42BPA-206ENST00000429440 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
CDC42BPA-206ENST00000429440 MAP2K2P36507 400 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 C11orf91Q3C1V1 193 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 PSD3Q9NYI0 1048 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 FHOD1Q9Y613 1164 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 MLH3Q9UHC1 1453 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 ADGRB3O60242 1522 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 H2AFXP16104 143 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 SART3Q15020 963 aaKnown RBP10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 ANKRD20A12PQ8NF67 263 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 PPM1EQ8WY54 764 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 STK26Q9P289 416 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
CDC42BPA-206ENST00000429440 HMGB1P09429 215 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 BMP2KLQ5H9B9 411 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 ZDHHC9Q9Y397 364 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 CD109Q6YHK3 1445 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 CFAP74Q9C0B2 1584 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 KLHL33A6NCF5 533 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 ATP8B1O43520 1251 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 TACO1Q9BSH4 297 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
CDC42BPA-206ENST00000429440 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 NPATQ14207 1427 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 MMS22LQ6ZRQ5 1243 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 ERVK-7P63135 1459 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 CPP00450 1065 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 IVLP07476 585 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 PKP1Q13835 747 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 TBC1D22AQ8WUA7 517 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 PPLO60437 1756 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 SIGLEC1Q9BZZ2 1709 aa10.55□□□□□ -0.72
CDC42BPA-206ENST00000429440 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 CFAP70Q5T0N1 1121 aa10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 ZNF592Q92610 1267 aa10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 AK7Q96M32 723 aa10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 C16orf45Q96MC5 204 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-206ENST00000429440 RARSP54136 660 aaKnown RBP10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 GTF3C6Q969F1 213 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 RLBP1P12271 317 aa10.53□□□□□ -0.72
CDC42BPA-206ENST00000429440 CEP135Q66GS9 1140 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms