RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 TNS3Q68CZ2 1445 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
SENP3-202ENST00000429205 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 PDE4AP27815 886 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 CABLES1Q8TDN4 633 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 ZNF428Q96B54 188 aa16.85■□□□□ 0.29
SENP3-202ENST00000429205 TRIM27P14373 513 aa16.84■□□□□ 0.29
SENP3-202ENST00000429205 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
SENP3-202ENST00000429205 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
SENP3-202ENST00000429205 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
SENP3-202ENST00000429205 DZIP1LQ8IYY4 767 aaKnown RBP16.84■□□□□ 0.29
SENP3-202ENST00000429205 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
SENP3-202ENST00000429205 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.29
SENP3-202ENST00000429205 PTMSP20962 102 aa16.83■□□□□ 0.28
SENP3-202ENST00000429205 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
SENP3-202ENST00000429205 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
SENP3-202ENST00000429205 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
SENP3-202ENST00000429205 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 CNPY4Q8N129 248 aa16.82■□□□□ 0.28
SENP3-202ENST00000429205 ZNF622Q969S3 477 aaKnown RBP eCLIP16.82■□□□□ 0.28
SENP3-202ENST00000429205 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
SENP3-202ENST00000429205 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
SENP3-202ENST00000429205 DMTNQ08495 405 aa16.81■□□□□ 0.28
SENP3-202ENST00000429205 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
SENP3-202ENST00000429205 BRPF1P55201 1214 aaPredicted RBP16.81■□□□□ 0.28
SENP3-202ENST00000429205 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
SENP3-202ENST00000429205 MVPQ14764 893 aaKnown RBP16.8■□□□□ 0.28
SENP3-202ENST00000429205 CENPQQ7L2Z9 268 aaPredicted RBP16.8■□□□□ 0.28
SENP3-202ENST00000429205 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
SENP3-202ENST00000429205 ERBB3P21860 1342 aa16.8■□□□□ 0.28
SENP3-202ENST00000429205 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
SENP3-202ENST00000429205 MS4A1P11836 297 aa16.8■□□□□ 0.28
SENP3-202ENST00000429205 SLC20A2Q08357 652 aa16.8■□□□□ 0.28
SENP3-202ENST00000429205 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
SENP3-202ENST00000429205 MCCP23508 829 aa16.79■□□□□ 0.28
SENP3-202ENST00000429205 TSPYL4Q9UJ04 414 aa16.79■□□□□ 0.28
SENP3-202ENST00000429205 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
SENP3-202ENST00000429205 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
SENP3-202ENST00000429205 SOS2Q07890 1332 aaPredicted RBP16.78■□□□□ 0.28
SENP3-202ENST00000429205 CLSTN1O94985 981 aa16.78■□□□□ 0.28
SENP3-202ENST00000429205 KIAA0232Q92628 1395 aa16.78■□□□□ 0.28
SENP3-202ENST00000429205 CHRNA2Q15822 529 aa16.77■□□□□ 0.28
SENP3-202ENST00000429205 CRYBG1Q9Y4K1 1723 aa16.77■□□□□ 0.28
SENP3-202ENST00000429205 IGHDP01880 384 aa16.77■□□□□ 0.27
SENP3-202ENST00000429205 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.27
SENP3-202ENST00000429205 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.27
SENP3-202ENST00000429205 ITPRIPQ8IWB1 547 aa16.76■□□□□ 0.27
SENP3-202ENST00000429205 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.76■□□□□ 0.27
SENP3-202ENST00000429205 PCDHB15Q9Y5E8 787 aa16.76■□□□□ 0.27
SENP3-202ENST00000429205 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
SENP3-202ENST00000429205 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
SENP3-202ENST00000429205 ARHGAP45Q92619 1136 aa16.74■□□□□ 0.27
SENP3-202ENST00000429205 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
SENP3-202ENST00000429205 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
SENP3-202ENST00000429205 GTPBP4Q9BZE4 634 aaKnown RBP16.74■□□□□ 0.27
SENP3-202ENST00000429205 NLRP2Q9NX02 1062 aa16.74■□□□□ 0.27
SENP3-202ENST00000429205 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
SENP3-202ENST00000429205 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
SENP3-202ENST00000429205 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
SENP3-202ENST00000429205 CPDO75976 1380 aa16.73■□□□□ 0.27
SENP3-202ENST00000429205 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SENP3-202ENST00000429205 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
SENP3-202ENST00000429205 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
SENP3-202ENST00000429205 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
SENP3-202ENST00000429205 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
SENP3-202ENST00000429205 COL18A1P39060 1754 aa16.72■□□□□ 0.27
SENP3-202ENST00000429205 NHSL1Q5SYE7 1610 aa16.72■□□□□ 0.27
SENP3-202ENST00000429205 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
SENP3-202ENST00000429205 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
SENP3-202ENST00000429205 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
SENP3-202ENST00000429205 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
SENP3-202ENST00000429205 PHF14O94880 888 aa16.7■□□□□ 0.26
SENP3-202ENST00000429205 BABAM1Q9NWV8 329 aa16.7■□□□□ 0.26
SENP3-202ENST00000429205 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
SENP3-202ENST00000429205 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 ABCC4O15439 1325 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
SENP3-202ENST00000429205 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
SENP3-202ENST00000429205 ABCA3Q99758 1704 aa16.68■□□□□ 0.26
SENP3-202ENST00000429205 FAM193AP78312 1265 aa16.68■□□□□ 0.26
SENP3-202ENST00000429205 ABCC6O95255 1503 aa16.68■□□□□ 0.26
SENP3-202ENST00000429205 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
SENP3-202ENST00000429205 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
SENP3-202ENST00000429205 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
SENP3-202ENST00000429205 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
SENP3-202ENST00000429205 TEFQ10587 303 aa16.66■□□□□ 0.26
SENP3-202ENST00000429205 FAM208AQ9UK61 1670 aaKnown RBP16.66■□□□□ 0.26
SENP3-202ENST00000429205 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
SENP3-202ENST00000429205 YY1AP1Q9H869 796 aa16.66■□□□□ 0.26
SENP3-202ENST00000429205 MEGF6O75095 1541 aa16.65■□□□□ 0.26
SENP3-202ENST00000429205 ZBTB7BO15156 539 aaPredicted RBP16.65■□□□□ 0.26
SENP3-202ENST00000429205 TATP17735 454 aaPredicted RBP16.65■□□□□ 0.26
SENP3-202ENST00000429205 RGS12O14924 1447 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms