RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
PABPC1P11-201ENST00000428966 GAS2L2Q8NHY3 880 aa15.35■□□□□ 0.05
PABPC1P11-201ENST00000428966 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
PABPC1P11-201ENST00000428966 ASAP1Q9ULH1 1129 aa15.35■□□□□ 0.05
PABPC1P11-201ENST00000428966 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
PABPC1P11-201ENST00000428966 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
PABPC1P11-201ENST00000428966 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
PABPC1P11-201ENST00000428966 MAP3K5Q99683 1374 aa15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 CABP4P57796 275 aa15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 ITGB4P16144 1822 aa15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 IL17REQ8NFR9 667 aa15.33■□□□□ 0.04
PABPC1P11-201ENST00000428966 ATG3Q9NT62 314 aa15.32■□□□□ 0.04
PABPC1P11-201ENST00000428966 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
PABPC1P11-201ENST00000428966 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
PABPC1P11-201ENST00000428966 CCNL1Q9UK58 526 aaPredicted RBP15.31■□□□□ 0.04
PABPC1P11-201ENST00000428966 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
PABPC1P11-201ENST00000428966 ADAMTS7Q9UKP4 1686 aa15.3■□□□□ 0.04
PABPC1P11-201ENST00000428966 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
PABPC1P11-201ENST00000428966 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
PABPC1P11-201ENST00000428966 SMARCC1Q92922 1105 aaPredicted RBP15.3■□□□□ 0.04
PABPC1P11-201ENST00000428966 MRC1P22897 1456 aa15.3■□□□□ 0.04
PABPC1P11-201ENST00000428966 LY75O60449 1722 aa15.29■□□□□ 0.04
PABPC1P11-201ENST00000428966 CEMIPQ8WUJ3 1361 aa15.29■□□□□ 0.04
PABPC1P11-201ENST00000428966 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
PABPC1P11-201ENST00000428966 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
PABPC1P11-201ENST00000428966 PAPPAQ13219 1627 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 SIK1P57059 783 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 ZNF827Q17R98 1081 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 MCM10Q7L590 875 aa15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 PNNQ9H307 717 aaKnown RBP15.28■□□□□ 0.04
PABPC1P11-201ENST00000428966 NEFMP07197 916 aa15.27■□□□□ 0.04
PABPC1P11-201ENST00000428966 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.04
PABPC1P11-201ENST00000428966 SLC15A2Q16348 729 aa15.27■□□□□ 0.04
PABPC1P11-201ENST00000428966 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
PABPC1P11-201ENST00000428966 MAPK8IP3Q9UPT6 1336 aa15.27■□□□□ 0.04
PABPC1P11-201ENST00000428966 NFE2L2Q16236 605 aa15.27■□□□□ 0.03
PABPC1P11-201ENST00000428966 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.03
PABPC1P11-201ENST00000428966 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 TEFQ10587 303 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 ITPK1Q13572 414 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 ERICH6BQ5W0A0 696 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 RTF1Q92541 710 aaKnown RBP15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 STK32BQ9NY57 414 aa15.26■□□□□ 0.03
PABPC1P11-201ENST00000428966 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
PABPC1P11-201ENST00000428966 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
PABPC1P11-201ENST00000428966 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
PABPC1P11-201ENST00000428966 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
PABPC1P11-201ENST00000428966 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
PABPC1P11-201ENST00000428966 TMPOP42166 694 aaKnown RBP15.24■□□□□ 0.03
PABPC1P11-201ENST00000428966 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
PABPC1P11-201ENST00000428966 LINC00116Q8NCU8 138 aa15.23■□□□□ 0.03
PABPC1P11-201ENST00000428966 THUMPD2Q9BTF0 503 aaKnown RBP15.23■□□□□ 0.03
PABPC1P11-201ENST00000428966 RIPK4P57078 832 aa15.22■□□□□ 0.03
PABPC1P11-201ENST00000428966 NEUROD2Q15784 382 aa15.22■□□□□ 0.03
PABPC1P11-201ENST00000428966 AMIGO3Q86WK7 504 aa15.22■□□□□ 0.03
PABPC1P11-201ENST00000428966 TFCP2L1Q9NZI6 479 aa15.22■□□□□ 0.03
PABPC1P11-201ENST00000428966 ZNF790Q6PG37 636 aa15.21■□□□□ 0.03
PABPC1P11-201ENST00000428966 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
PABPC1P11-201ENST00000428966 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.03
PABPC1P11-201ENST00000428966 C5P01031 1676 aa15.21■□□□□ 0.02
PABPC1P11-201ENST00000428966 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
PABPC1P11-201ENST00000428966 BTBD11A6QL63 1104 aa15.2■□□□□ 0.02
PABPC1P11-201ENST00000428966 KCNQ3O43525 872 aa15.2■□□□□ 0.02
PABPC1P11-201ENST00000428966 ZNF496Q96IT1 587 aaPredicted RBP15.2■□□□□ 0.02
PABPC1P11-201ENST00000428966 ANP32EQ9BTT0 268 aa15.2■□□□□ 0.02
PABPC1P11-201ENST00000428966 APAF1O14727 1248 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 SMIM5Q71RC9 77 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 SIPA1L3O60292 1781 aaPredicted RBP15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 C4BP0C0L5 1744 aa15.19■□□□□ 0.02
PABPC1P11-201ENST00000428966 TAF1LQ8IZX4 1826 aa15.18■□□□□ 0.02
PABPC1P11-201ENST00000428966 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
PABPC1P11-201ENST00000428966 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 DNAJC10Q8IXB1 793 aa15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 AK7Q96M32 723 aa15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 ZNF831Q5JPB2 1677 aa15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 ZBTB7AO95365 584 aa15.17■□□□□ 0.02
PABPC1P11-201ENST00000428966 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 GNPATO15228 680 aa15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 HMGB2P26583 209 aaKnown RBP15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 COL23A1Q86Y22 540 aaPredicted RBP15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
PABPC1P11-201ENST00000428966 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms