RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 DCTPP1Q9H773 170 aa17.36■□□□□ 0.37
NCBP2-205ENST00000428425 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
NCBP2-205ENST00000428425 TOM1O60784 492 aa17.35■□□□□ 0.37
NCBP2-205ENST00000428425 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
NCBP2-205ENST00000428425 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
NCBP2-205ENST00000428425 AKAP4Q5JQC9 854 aa17.34■□□□□ 0.37
NCBP2-205ENST00000428425 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
NCBP2-205ENST00000428425 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
NCBP2-205ENST00000428425 ERBB3P21860 1342 aa17.34■□□□□ 0.37
NCBP2-205ENST00000428425 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.37
NCBP2-205ENST00000428425 PLEKHO1Q53GL0 409 aaPredicted RBP17.33■□□□□ 0.37
NCBP2-205ENST00000428425 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.37
NCBP2-205ENST00000428425 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.37
NCBP2-205ENST00000428425 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.37
NCBP2-205ENST00000428425 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.37
NCBP2-205ENST00000428425 APBB1O00213 710 aa17.33■□□□□ 0.36
NCBP2-205ENST00000428425 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
NCBP2-205ENST00000428425 DCCP43146 1447 aa17.32■□□□□ 0.36
NCBP2-205ENST00000428425 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
NCBP2-205ENST00000428425 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
NCBP2-205ENST00000428425 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
NCBP2-205ENST00000428425 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
NCBP2-205ENST00000428425 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
NCBP2-205ENST00000428425 RNMTO43148 476 aaKnown RBP17.31■□□□□ 0.36
NCBP2-205ENST00000428425 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
NCBP2-205ENST00000428425 TEFQ10587 303 aa17.31■□□□□ 0.36
NCBP2-205ENST00000428425 C22orf23Q9BZE7 217 aa17.31■□□□□ 0.36
NCBP2-205ENST00000428425 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
NCBP2-205ENST00000428425 ANXA1P04083 346 aa17.3■□□□□ 0.36
NCBP2-205ENST00000428425 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
NCBP2-205ENST00000428425 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
NCBP2-205ENST00000428425 AMOTQ4VCS5 1084 aa17.3■□□□□ 0.36
NCBP2-205ENST00000428425 PLEKHM2Q8IWE5 1019 aa17.3■□□□□ 0.36
NCBP2-205ENST00000428425 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
NCBP2-205ENST00000428425 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
NCBP2-205ENST00000428425 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
NCBP2-205ENST00000428425 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
NCBP2-205ENST00000428425 COL18A1P39060 1754 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 NCOA3Q9Y6Q9 1424 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
NCBP2-205ENST00000428425 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
NCBP2-205ENST00000428425 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.36
NCBP2-205ENST00000428425 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.35
NCBP2-205ENST00000428425 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.35
NCBP2-205ENST00000428425 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.35
NCBP2-205ENST00000428425 MEGF6O75095 1541 aa17.26■□□□□ 0.35
NCBP2-205ENST00000428425 GNAI2P04899 355 aa17.26■□□□□ 0.35
NCBP2-205ENST00000428425 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
NCBP2-205ENST00000428425 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
NCBP2-205ENST00000428425 SIPA1L3O60292 1781 aaPredicted RBP17.25■□□□□ 0.35
NCBP2-205ENST00000428425 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
NCBP2-205ENST00000428425 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
NCBP2-205ENST00000428425 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
NCBP2-205ENST00000428425 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
NCBP2-205ENST00000428425 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
NCBP2-205ENST00000428425 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
NCBP2-205ENST00000428425 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
NCBP2-205ENST00000428425 ADAMTS7Q9UKP4 1686 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 OVOS2A0A0G2JMS6 1433 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 KDM6AO15550 1401 aaPredicted RBP17.23■□□□□ 0.35
NCBP2-205ENST00000428425 BECN1Q14457 450 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 TTC22Q5TAA0 569 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 HOXB7P09629 217 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
NCBP2-205ENST00000428425 SLKQ9H2G2 1235 aaPredicted RBP17.23■□□□□ 0.35
NCBP2-205ENST00000428425 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
NCBP2-205ENST00000428425 GNAI3P08754 354 aa17.22■□□□□ 0.35
NCBP2-205ENST00000428425 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
NCBP2-205ENST00000428425 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
NCBP2-205ENST00000428425 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
NCBP2-205ENST00000428425 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
NCBP2-205ENST00000428425 HMMRO75330 724 aa17.21■□□□□ 0.35
NCBP2-205ENST00000428425 SLC39A6Q13433 755 aa17.21■□□□□ 0.35
NCBP2-205ENST00000428425 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
NCBP2-205ENST00000428425 ADCY9O60503 1353 aa17.21■□□□□ 0.35
NCBP2-205ENST00000428425 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
NCBP2-205ENST00000428425 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
NCBP2-205ENST00000428425 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
NCBP2-205ENST00000428425 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
NCBP2-205ENST00000428425 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
NCBP2-205ENST00000428425 CDC45O75419 566 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
NCBP2-205ENST00000428425 PHKG2P15735 406 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
NCBP2-205ENST00000428425 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
NCBP2-205ENST00000428425 KIF2CQ99661 725 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
NCBP2-205ENST00000428425 SDSP20132 328 aa17.18■□□□□ 0.34
NCBP2-205ENST00000428425 DEKP35659 375 aaKnown RBP17.18■□□□□ 0.34
NCBP2-205ENST00000428425 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
NCBP2-205ENST00000428425 CYP27B1O15528 508 aa17.17■□□□□ 0.34
NCBP2-205ENST00000428425 NFATC2IPQ8NCF5 419 aa17.17■□□□□ 0.34
NCBP2-205ENST00000428425 FRAT2O75474 233 aaPredicted RBP17.17■□□□□ 0.34
NCBP2-205ENST00000428425 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms