RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.39
MMP11-202ENST00000428253 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
MMP11-202ENST00000428253 NEFMP07197 916 aa23.7■■□□□ 1.38
MMP11-202ENST00000428253 SLC27A3Q5K4L6 730 aa23.7■■□□□ 1.38
MMP11-202ENST00000428253 RUNDC1Q96C34 613 aa23.7■■□□□ 1.38
MMP11-202ENST00000428253 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
MMP11-202ENST00000428253 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
MMP11-202ENST00000428253 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
MMP11-202ENST00000428253 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
MMP11-202ENST00000428253 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
MMP11-202ENST00000428253 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
MMP11-202ENST00000428253 KCNQ4P56696 695 aa23.65■■□□□ 1.38
MMP11-202ENST00000428253 MCM10Q7L590 875 aa23.65■■□□□ 1.38
MMP11-202ENST00000428253 CCNL1Q9UK58 526 aaPredicted RBP23.65■■□□□ 1.38
MMP11-202ENST00000428253 TAF1LQ8IZX4 1826 aa23.64■■□□□ 1.38
MMP11-202ENST00000428253 LOC102724428A0A0B4J2F2 783 aa23.64■■□□□ 1.37
MMP11-202ENST00000428253 SIK1P57059 783 aa23.64■■□□□ 1.37
MMP11-202ENST00000428253 DCTN1Q14203 1278 aa23.64■■□□□ 1.37
MMP11-202ENST00000428253 RTF1Q92541 710 aaKnown RBP23.64■■□□□ 1.37
MMP11-202ENST00000428253 SLC4A9Q96Q91 983 aa23.64■■□□□ 1.37
MMP11-202ENST00000428253 RIPK4P57078 832 aa23.62■■□□□ 1.37
MMP11-202ENST00000428253 TEFQ10587 303 aa23.62■■□□□ 1.37
MMP11-202ENST00000428253 UBR2Q8IWV8 1755 aa23.61■■□□□ 1.37
MMP11-202ENST00000428253 NBPF14Q5TI25 921 aa23.61■■□□□ 1.37
MMP11-202ENST00000428253 AKT1S1Q96B36 256 aa23.61■■□□□ 1.37
MMP11-202ENST00000428253 C5P01031 1676 aa23.6■■□□□ 1.37
MMP11-202ENST00000428253 KCPQ6ZWJ8 1503 aa23.6■■□□□ 1.37
MMP11-202ENST00000428253 CICQ96RK0 1608 aaPredicted RBP23.6■■□□□ 1.37
MMP11-202ENST00000428253 CCER2I3L3R5 266 aa23.6■■□□□ 1.37
MMP11-202ENST00000428253 SLC39A6Q13433 755 aa23.6■■□□□ 1.37
MMP11-202ENST00000428253 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
MMP11-202ENST00000428253 APAF1O14727 1248 aa23.59■■□□□ 1.37
MMP11-202ENST00000428253 ITPK1Q13572 414 aa23.59■■□□□ 1.37
MMP11-202ENST00000428253 SLC15A2Q16348 729 aa23.59■■□□□ 1.37
MMP11-202ENST00000428253 ZNF827Q17R98 1081 aa23.59■■□□□ 1.37
MMP11-202ENST00000428253 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
MMP11-202ENST00000428253 R3HDM1Q15032 1099 aaKnown RBP23.58■■□□□ 1.37
MMP11-202ENST00000428253 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
MMP11-202ENST00000428253 ZNF790Q6PG37 636 aa23.57■■□□□ 1.36
MMP11-202ENST00000428253 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
MMP11-202ENST00000428253 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
MMP11-202ENST00000428253 LMOD3Q0VAK6 560 aa23.56■■□□□ 1.36
MMP11-202ENST00000428253 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
MMP11-202ENST00000428253 LINC00116Q8NCU8 138 aa23.56■■□□□ 1.36
MMP11-202ENST00000428253 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
MMP11-202ENST00000428253 STK32BQ9NY57 414 aa23.56■■□□□ 1.36
MMP11-202ENST00000428253 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
MMP11-202ENST00000428253 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
MMP11-202ENST00000428253 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
MMP11-202ENST00000428253 HMGB2P26583 209 aaKnown RBP23.55■■□□□ 1.36
MMP11-202ENST00000428253 C4BP0C0L5 1744 aa23.55■■□□□ 1.36
MMP11-202ENST00000428253 TJP1Q07157 1748 aa23.55■■□□□ 1.36
MMP11-202ENST00000428253 QSER1Q2KHR3 1735 aa23.54■■□□□ 1.36
MMP11-202ENST00000428253 KCNQ3O43525 872 aa23.54■■□□□ 1.36
MMP11-202ENST00000428253 NEUROD2Q15784 382 aa23.54■■□□□ 1.36
MMP11-202ENST00000428253 MIER1Q8N108 512 aa23.54■■□□□ 1.36
MMP11-202ENST00000428253 VSIG10Q8N0Z9 540 aa23.53■■□□□ 1.36
MMP11-202ENST00000428253 ZNF496Q96IT1 587 aaPredicted RBP23.53■■□□□ 1.36
MMP11-202ENST00000428253 TUBGCP6Q96RT7 1819 aa23.53■■□□□ 1.36
MMP11-202ENST00000428253 NCBP3Q53F19 620 aaKnown RBP23.52■■□□□ 1.36
MMP11-202ENST00000428253 FAM9BQ8IZU0 186 aa23.52■■□□□ 1.36
MMP11-202ENST00000428253 KDM3BQ7LBC6 1761 aa23.52■■□□□ 1.36
MMP11-202ENST00000428253 CASZ1Q86V15 1759 aa23.52■■□□□ 1.36
MMP11-202ENST00000428253 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
MMP11-202ENST00000428253 TTC5Q8N0Z6 440 aa23.5■■□□□ 1.35
MMP11-202ENST00000428253 HEG1Q9ULI3 1381 aa23.5■■□□□ 1.35
MMP11-202ENST00000428253 UBR3Q6ZT12 1888 aa23.49■■□□□ 1.35
MMP11-202ENST00000428253 RC3H1Q5TC82 1133 aaKnown RBP23.49■■□□□ 1.35
MMP11-202ENST00000428253 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
MMP11-202ENST00000428253 BABAM1Q9NWV8 329 aa23.49■■□□□ 1.35
MMP11-202ENST00000428253 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
MMP11-202ENST00000428253 PNPLA7Q6ZV29 1317 aa23.49■■□□□ 1.35
MMP11-202ENST00000428253 CCDC27Q2M243 656 aa23.48■■□□□ 1.35
MMP11-202ENST00000428253 AMIGO3Q86WK7 504 aa23.48■■□□□ 1.35
MMP11-202ENST00000428253 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
MMP11-202ENST00000428253 CNTNAP4Q9C0A0 1308 aa23.48■■□□□ 1.35
MMP11-202ENST00000428253 FMNL2Q96PY5 1086 aa23.47■■□□□ 1.35
MMP11-202ENST00000428253 TFCP2L1Q9NZI6 479 aa23.47■■□□□ 1.35
MMP11-202ENST00000428253 CYP19A1P11511 503 aaPredicted RBP23.46■■□□□ 1.35
MMP11-202ENST00000428253 CHL1O00533 1208 aa23.45■■□□□ 1.34
MMP11-202ENST00000428253 ZNF853P0CG23 659 aa23.44■■□□□ 1.34
MMP11-202ENST00000428253 CRKLP46109 303 aaKnown RBP23.44■■□□□ 1.34
MMP11-202ENST00000428253 EIF4A1P60842 406 aaKnown RBP23.44■■□□□ 1.34
MMP11-202ENST00000428253 INTS5Q6P9B9 1019 aaKnown RBP23.44■■□□□ 1.34
MMP11-202ENST00000428253 AK7Q96M32 723 aa23.44■■□□□ 1.34
MMP11-202ENST00000428253 WWC1Q8IX03 1113 aa23.43■■□□□ 1.34
MMP11-202ENST00000428253 SSFA2P28290 1259 aa23.42■■□□□ 1.34
MMP11-202ENST00000428253 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
MMP11-202ENST00000428253 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
MMP11-202ENST00000428253 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 GNPATO15228 680 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 RPS6KA4O75676 772 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 SMIM5Q71RC9 77 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 TSPYL4Q9UJ04 414 aa23.41■■□□□ 1.34
MMP11-202ENST00000428253 PRAMEF22A3QJZ6 481 aa23.4■■□□□ 1.34
MMP11-202ENST00000428253 SNRPA1P09661 255 aaKnown RBP23.4■■□□□ 1.34
MMP11-202ENST00000428253 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
MMP11-202ENST00000428253 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
MMP11-202ENST00000428253 CCDC87Q9NVE4 849 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms