RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PLEKHF1Q96S99 279 aa9.13□□□□□ -0.95
CDC7-203ENST00000428239 SOCS7O14512 581 aa9.12□□□□□ -0.95
CDC7-203ENST00000428239 TAF7Q15545 349 aaPredicted RBP9.12□□□□□ -0.95
CDC7-203ENST00000428239 NECTIN2Q92692 538 aa9.12□□□□□ -0.95
CDC7-203ENST00000428239 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
CDC7-203ENST00000428239 TXNRD1Q16881 649 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 AK7Q96M32 723 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 PALLDQ8WX93 1383 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 PHF14O94880 888 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 TFCP2L1Q9NZI6 479 aa9.11□□□□□ -0.95
CDC7-203ENST00000428239 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
CDC7-203ENST00000428239 HTATSF1O43719 755 aaKnown RBP9.1□□□□□ -0.95
CDC7-203ENST00000428239 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 SIK1P57059 783 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
CDC7-203ENST00000428239 FMNL2Q96PY5 1086 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 STK32BQ9NY57 414 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 GNAI1P63096 354 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 ZNF790Q6PG37 636 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 LRRC37A3O60309 1634 aa9.1□□□□□ -0.95
CDC7-203ENST00000428239 ATG3Q9NT62 314 aa9.09□□□□□ -0.95
CDC7-203ENST00000428239 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
CDC7-203ENST00000428239 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
CDC7-203ENST00000428239 TSR2Q969E8 191 aaKnown RBP9.09□□□□□ -0.95
CDC7-203ENST00000428239 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 KDM6AO15550 1401 aaPredicted RBP9.08□□□□□ -0.96
CDC7-203ENST00000428239 THSD7AQ9UPZ6 1657 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 NPHP1O15259 732 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 KCNQ3O43525 872 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 STARD3NLO95772 234 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 ZNF496Q96IT1 587 aaPredicted RBP9.08□□□□□ -0.96
CDC7-203ENST00000428239 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 GNPATO15228 680 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 DNAJC10Q8IXB1 793 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 TRIM35Q9UPQ4 493 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 BRWD3Q6RI45 1802 aa9.08□□□□□ -0.96
CDC7-203ENST00000428239 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
CDC7-203ENST00000428239 TCERG1O14776 1098 aaKnown RBP9.07□□□□□ -0.96
CDC7-203ENST00000428239 R3HDM1Q15032 1099 aaKnown RBP9.07□□□□□ -0.96
CDC7-203ENST00000428239 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
CDC7-203ENST00000428239 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
CDC7-203ENST00000428239 EP400Q96L91 3159 aa9.06□□□□□ -0.96
CDC7-203ENST00000428239 BCL9O00512 1426 aa9.06□□□□□ -0.96
CDC7-203ENST00000428239 PLSCR1O15162 318 aa9.06□□□□□ -0.96
CDC7-203ENST00000428239 MYL6BP14649 208 aa9.06□□□□□ -0.96
CDC7-203ENST00000428239 HMGB2P26583 209 aaKnown RBP9.06□□□□□ -0.96
CDC7-203ENST00000428239 SNRPA1P09661 255 aaKnown RBP9.06□□□□□ -0.96
CDC7-203ENST00000428239 SLC27A3Q5K4L6 730 aa9.06□□□□□ -0.96
CDC7-203ENST00000428239 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 PPP1R1BQ9UD71 204 aaPredicted RBP9.05□□□□□ -0.96
CDC7-203ENST00000428239 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
CDC7-203ENST00000428239 KRT24Q2M2I5 525 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 STK31Q9BXU1 1019 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 IFT57Q9NWB7 429 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
CDC7-203ENST00000428239 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
CDC7-203ENST00000428239 RGPD1P0DJD0 1748 aa9.04□□□□□ -0.96
CDC7-203ENST00000428239 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
CDC7-203ENST00000428239 TEX13AQ9BXU3 409 aaPredicted RBP9.04□□□□□ -0.96
CDC7-203ENST00000428239 RFC4P35249 363 aa9.04□□□□□ -0.96
CDC7-203ENST00000428239 A1BGP04217 495 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 DUSP27Q5VZP5 1158 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 SMIM5Q71RC9 77 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 WDR63Q8IWG1 891 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 E9PSI1 815 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 CRKLP46109 303 aaKnown RBP9.03□□□□□ -0.96
CDC7-203ENST00000428239 EXOSC9Q06265 439 aaKnown RBP9.03□□□□□ -0.96
CDC7-203ENST00000428239 ITPK1Q13572 414 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 CEMIPQ8WUJ3 1361 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 ZPR1O75312 459 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 ANXA1P04083 346 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 CCDC87Q9NVE4 849 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 USP16Q9Y5T5 823 aa9.03□□□□□ -0.96
CDC7-203ENST00000428239 CCDC27Q2M243 656 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 TWISTNBQ3B726 338 aaPredicted RBP9.02□□□□□ -0.97
CDC7-203ENST00000428239 TRAPPC3LQ5T215 181 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 LINC00116Q8NCU8 138 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.02□□□□□ -0.97
CDC7-203ENST00000428239 CHL1O00533 1208 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 ZBTB7AO95365 584 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 EIF4A1P60842 406 aaKnown RBP9.02□□□□□ -0.97
CDC7-203ENST00000428239 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 CHMP4AQ9BY43 222 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 HEG1Q9ULI3 1381 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 SLC15A2Q16348 729 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 PROM2Q8N271 834 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 ANO8Q9HCE9 1232 aaPredicted RBP9.02□□□□□ -0.97
CDC7-203ENST00000428239 ZBTB1Q9Y2K1 713 aa9.02□□□□□ -0.97
CDC7-203ENST00000428239 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 FANCIQ9NVI1 1328 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms