RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 DLG5Q8TDM6 1919 aa33.3■■■□□ 2.92
HERPUD2-205ENST00000427455 C5P01031 1676 aa33.3■■■□□ 2.92
HERPUD2-205ENST00000427455 IL17REQ8NFR9 667 aa33.3■■■□□ 2.92
HERPUD2-205ENST00000427455 ADAMTS8Q9UP79 889 aa33.3■■■□□ 2.92
HERPUD2-205ENST00000427455 SIPA1L3O60292 1781 aaPredicted RBP33.29■■■□□ 2.92
HERPUD2-205ENST00000427455 PSDA5PKW4 1024 aaPredicted RBP33.29■■■□□ 2.92
HERPUD2-205ENST00000427455 NFE2L2Q16236 605 aa33.29■■■□□ 2.92
HERPUD2-205ENST00000427455 CCDC184Q52MB2 194 aa33.29■■■□□ 2.92
HERPUD2-205ENST00000427455 RTF1Q92541 710 aaKnown RBP33.29■■■□□ 2.92
HERPUD2-205ENST00000427455 HTATSF1O43719 755 aaKnown RBP33.28■■■□□ 2.92
HERPUD2-205ENST00000427455 KCNQ4P56696 695 aa33.28■■■□□ 2.92
HERPUD2-205ENST00000427455 STK32BQ9NY57 414 aa33.28■■■□□ 2.92
HERPUD2-205ENST00000427455 ZNF831Q5JPB2 1677 aa33.27■■■□□ 2.92
HERPUD2-205ENST00000427455 LOC102724428A0A0B4J2F2 783 aa33.27■■■□□ 2.92
HERPUD2-205ENST00000427455 SIK1P57059 783 aa33.27■■■□□ 2.92
HERPUD2-205ENST00000427455 TEFQ10587 303 aa33.27■■■□□ 2.92
HERPUD2-205ENST00000427455 TAF1LQ8IZX4 1826 aa33.27■■■□□ 2.92
HERPUD2-205ENST00000427455 HMGB2P26583 209 aaKnown RBP33.26■■■□□ 2.91
HERPUD2-205ENST00000427455 MRS2Q9HD23 443 aa33.26■■■□□ 2.91
HERPUD2-205ENST00000427455 SLC15A2Q16348 729 aa33.24■■■□□ 2.91
HERPUD2-205ENST00000427455 CCDC146Q8IYE0 955 aa33.24■■■□□ 2.91
HERPUD2-205ENST00000427455 RUNDC1Q96C34 613 aa33.24■■■□□ 2.91
HERPUD2-205ENST00000427455 MCM10Q7L590 875 aa33.22■■■□□ 2.91
HERPUD2-205ENST00000427455 ZNF827Q17R98 1081 aa33.21■■■□□ 2.91
HERPUD2-205ENST00000427455 AKT1S1Q96B36 256 aa33.21■■■□□ 2.91
HERPUD2-205ENST00000427455 C4BP0C0L5 1744 aa33.2■■■□□ 2.91
HERPUD2-205ENST00000427455 RBM42Q9BTD8 480 aaKnown RBP33.2■■■□□ 2.91
HERPUD2-205ENST00000427455 CICQ96RK0 1608 aaPredicted RBP33.2■■■□□ 2.9
HERPUD2-205ENST00000427455 QSER1Q2KHR3 1735 aa33.19■■■□□ 2.9
HERPUD2-205ENST00000427455 UBR2Q8IWV8 1755 aa33.19■■■□□ 2.9
HERPUD2-205ENST00000427455 ATP6V1AP38606 617 aa33.19■■■□□ 2.9
HERPUD2-205ENST00000427455 DCTN1Q14203 1278 aa33.19■■■□□ 2.9
HERPUD2-205ENST00000427455 KCPQ6ZWJ8 1503 aa33.18■■■□□ 2.9
HERPUD2-205ENST00000427455 TMPOP42166 694 aaKnown RBP33.18■■■□□ 2.9
HERPUD2-205ENST00000427455 CASZ1Q86V15 1759 aa33.17■■■□□ 2.9
HERPUD2-205ENST00000427455 PTCD1O75127 700 aaKnown RBP33.17■■■□□ 2.9
HERPUD2-205ENST00000427455 SLC39A6Q13433 755 aa33.17■■■□□ 2.9
HERPUD2-205ENST00000427455 PNISRQ8TF01 805 aaKnown RBP33.17■■■□□ 2.9
HERPUD2-205ENST00000427455 TUBGCP6Q96RT7 1819 aa33.16■■■□□ 2.9
HERPUD2-205ENST00000427455 ITPK1Q13572 414 aa33.16■■■□□ 2.9
HERPUD2-205ENST00000427455 SLC4A9Q96Q91 983 aa33.16■■■□□ 2.9
HERPUD2-205ENST00000427455 COL5A3P25940 1745 aaPredicted RBP33.16■■■□□ 2.9
HERPUD2-205ENST00000427455 RIPK4P57078 832 aa33.15■■■□□ 2.9
HERPUD2-205ENST00000427455 TJP1Q07157 1748 aa33.14■■■□□ 2.9
HERPUD2-205ENST00000427455 LMOD3Q0VAK6 560 aa33.14■■■□□ 2.9
HERPUD2-205ENST00000427455 TTC5Q8N0Z6 440 aa33.14■■■□□ 2.9
HERPUD2-205ENST00000427455 LINC00116Q8NCU8 138 aa33.13■■■□□ 2.89
HERPUD2-205ENST00000427455 BTBD11A6QL63 1104 aa33.12■■■□□ 2.89
HERPUD2-205ENST00000427455 ZNF790Q6PG37 636 aa33.12■■■□□ 2.89
HERPUD2-205ENST00000427455 TFCP2L1Q9NZI6 479 aa33.12■■■□□ 2.89
HERPUD2-205ENST00000427455 RRP7AQ9Y3A4 280 aaKnown RBP33.12■■■□□ 2.89
HERPUD2-205ENST00000427455 AK7Q96M32 723 aa33.09■■■□□ 2.89
HERPUD2-205ENST00000427455 NEUROD2Q15784 382 aa33.08■■■□□ 2.89
HERPUD2-205ENST00000427455 THUMPD2Q9BTF0 503 aaKnown RBP33.08■■■□□ 2.89
HERPUD2-205ENST00000427455 UBR3Q6ZT12 1888 aa33.08■■■□□ 2.89
HERPUD2-205ENST00000427455 PNPLA7Q6ZV29 1317 aa33.07■■■□□ 2.88
HERPUD2-205ENST00000427455 TAF7Q15545 349 aaPredicted RBP33.07■■■□□ 2.88
HERPUD2-205ENST00000427455 LRP5O75197 1615 aa33.06■■■□□ 2.88
HERPUD2-205ENST00000427455 VSIG10Q8N0Z9 540 aa33.06■■■□□ 2.88
HERPUD2-205ENST00000427455 CNTNAP4Q9C0A0 1308 aa33.05■■■□□ 2.88
HERPUD2-205ENST00000427455 APAF1O14727 1248 aa33.05■■■□□ 2.88
HERPUD2-205ENST00000427455 DIEXFQ68CQ4 756 aaKnown RBP33.05■■■□□ 2.88
HERPUD2-205ENST00000427455 PDGFDQ9GZP0 370 aaPredicted RBP33.05■■■□□ 2.88
HERPUD2-205ENST00000427455 KDM3BQ7LBC6 1761 aa33.05■■■□□ 2.88
HERPUD2-205ENST00000427455 ZNF496Q96IT1 587 aaPredicted RBP33.04■■■□□ 2.88
HERPUD2-205ENST00000427455 FMNL2Q96PY5 1086 aa33.03■■■□□ 2.88
HERPUD2-205ENST00000427455 HEG1Q9ULI3 1381 aa33.03■■■□□ 2.88
HERPUD2-205ENST00000427455 RC3H1Q5TC82 1133 aaKnown RBP33.02■■■□□ 2.88
HERPUD2-205ENST00000427455 TRIM35Q9UPQ4 493 aa33.02■■■□□ 2.88
HERPUD2-205ENST00000427455 SRCAPQ6ZRS2 3230 aa33.02■■■□□ 2.88
HERPUD2-205ENST00000427455 GNPATO15228 680 aa33.01■■■□□ 2.87
HERPUD2-205ENST00000427455 KCNQ3O43525 872 aa33.01■■■□□ 2.87
HERPUD2-205ENST00000427455 DNAJC10Q8IXB1 793 aa33.01■■■□□ 2.87
HERPUD2-205ENST00000427455 FLAD1Q8NFF5 587 aa33.01■■■□□ 2.87
HERPUD2-205ENST00000427455 SSFA2P28290 1259 aa32.99■■■□□ 2.87
HERPUD2-205ENST00000427455 MYH14Q7Z406 1995 aaKnown RBP32.99■■■□□ 2.87
HERPUD2-205ENST00000427455 CRKLP46109 303 aaKnown RBP32.98■■■□□ 2.87
HERPUD2-205ENST00000427455 CCER2I3L3R5 266 aa32.97■■■□□ 2.87
HERPUD2-205ENST00000427455 AMIGO3Q86WK7 504 aa32.97■■■□□ 2.87
HERPUD2-205ENST00000427455 FAM9BQ8IZU0 186 aa32.97■■■□□ 2.87
HERPUD2-205ENST00000427455 MIS18AQ9NYP9 233 aa32.97■■■□□ 2.87
HERPUD2-205ENST00000427455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.96■■■□□ 2.87
HERPUD2-205ENST00000427455 ZBTB7AO95365 584 aa32.96■■■□□ 2.87
HERPUD2-205ENST00000427455 COL23A1Q86Y22 540 aaPredicted RBP32.96■■■□□ 2.87
HERPUD2-205ENST00000427455 SLC16A10Q8TF71 515 aa32.96■■■□□ 2.87
HERPUD2-205ENST00000427455 MTFR1LQ9H019 292 aa32.96■■■□□ 2.87
HERPUD2-205ENST00000427455 PHF14O94880 888 aa32.95■■■□□ 2.87
HERPUD2-205ENST00000427455 CYP19A1P11511 503 aaPredicted RBP32.95■■■□□ 2.87
HERPUD2-205ENST00000427455 TEX13AQ9BXU3 409 aaPredicted RBP32.95■■■□□ 2.87
HERPUD2-205ENST00000427455 SPON1Q9HCB6 807 aa32.95■■■□□ 2.87
HERPUD2-205ENST00000427455 RTCBQ9Y3I0 505 aaKnown RBP32.95■■■□□ 2.87
HERPUD2-205ENST00000427455 BABAM1Q9NWV8 329 aa32.94■■■□□ 2.86
HERPUD2-205ENST00000427455 MSH5O43196 834 aa32.93■■■□□ 2.86
HERPUD2-205ENST00000427455 STARD3NLO95772 234 aa32.93■■■□□ 2.86
HERPUD2-205ENST00000427455 CCDC87Q9NVE4 849 aa32.93■■■□□ 2.86
HERPUD2-205ENST00000427455 TSPYL4Q9UJ04 414 aa32.93■■■□□ 2.86
HERPUD2-205ENST00000427455 RPS6KA4O75676 772 aa32.92■■■□□ 2.86
HERPUD2-205ENST00000427455 ADRA2BP18089 450 aa32.91■■■□□ 2.86
HERPUD2-205ENST00000427455 INTS5Q6P9B9 1019 aaKnown RBP32.91■■■□□ 2.86
HERPUD2-205ENST00000427455 SNRPA1P09661 255 aaKnown RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms