RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 UTP6Q9NYH9 597 aaKnown RBP9.03□□□□□ -0.96
LINC00649-203ENST00000427447 SLC8A1P32418 973 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 EPS15P42566 896 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 KLHDC4Q8TBB5 520 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 EPSTI1Q96J88 318 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 APBB1O00213 710 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 PCK1P35558 622 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 SKOR1P84550 965 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 KIF2CQ99661 725 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
LINC00649-203ENST00000427447 SDCCAG8Q86SQ7 713 aaPredicted RBP9.02□□□□□ -0.96
LINC00649-203ENST00000427447 CXorf38Q8TB03 319 aa9.02□□□□□ -0.96
LINC00649-203ENST00000427447 PPP1R9BQ96SB3 815 aa9.02□□□□□ -0.96
LINC00649-203ENST00000427447 NEMFO60524 1076 aa9.02□□□□□ -0.96
LINC00649-203ENST00000427447 OGFRQ9NZT2 677 aa9.02□□□□□ -0.96
LINC00649-203ENST00000427447 UBA5Q9GZZ9 404 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 PPP2R5AQ15172 486 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 USP33Q8TEY7 942 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 GBP5Q96PP8 586 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 PPP1R12AO14974 1030 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 HIP1RO75146 1068 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 SLC4A8Q2Y0W8 1093 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 EFHD2Q96C19 240 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 GPATCH3Q96I76 525 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 TERF1P54274 439 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 FAM76AQ8TAV0 307 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 SATB1Q01826 763 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 RPGRQ92834 1020 aaKnown RBP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 ATP2A3Q93084 1043 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 MATR3P43243 847 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 TNIP1Q15025 636 aa9.02□□□□□ -0.97
LINC00649-203ENST00000427447 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.97
LINC00649-203ENST00000427447 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-203ENST00000427447 MRFAP1Q9Y605 127 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 ZNF513Q8N8E2 541 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-203ENST00000427447 MAP4K4O95819 1239 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-203ENST00000427447 PDE4AP27815 886 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 SMTNL1A8MU46 457 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 CETN3O15182 167 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 CREB3O43889 395 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 IRX4P78413 519 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 HEATR3Q7Z4Q2 680 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 ARFGAP3Q9NP61 516 aa9.01□□□□□ -0.97
LINC00649-203ENST00000427447 IMMTQ16891 758 aaKnown RBP9□□□□□ -0.97
LINC00649-203ENST00000427447 CCDC73Q6ZRK6 1079 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 KIF4AO95239 1232 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 NOP14P78316 857 aaKnown RBP9□□□□□ -0.97
LINC00649-203ENST00000427447 BIRC2Q13490 618 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 SCLT1Q96NL6 688 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 PTPN14Q15678 1187 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 SPC24Q8NBT2 197 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 MORC4Q8TE76 937 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 MIS18AQ9NYP9 233 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 ZSCAN12O43309 604 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 UTP14CQ5TAP6 766 aaKnown RBP9□□□□□ -0.97
LINC00649-203ENST00000427447 C16orf45Q96MC5 204 aaPredicted RBP9□□□□□ -0.97
LINC00649-203ENST00000427447 SOX12O15370 315 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
LINC00649-203ENST00000427447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00649-203ENST00000427447 NEK1Q96PY6 1258 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 LRRD1A4D1F6 860 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 CBFA2T2O43439 604 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 IRAK4Q9NWZ3 460 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 PPP1R21Q6ZMI0 780 aa9□□□□□ -0.97
LINC00649-203ENST00000427447 DYNC1I2Q13409 638 aaKnown RBP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 A0A1B0GW55 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 LTV1Q96GA3 475 aaPredicted RBP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DUX4Q9UBX2 424 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 NUB1Q9Y5A7 615 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 TROVE2P10155 538 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 ACRBPQ8NEB7 543 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 MAN1A2O60476 641 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 EHBP1Q8NDI1 1231 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 MICAL1Q8TDZ2 1067 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 PIBF1Q8WXW3 757 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 IWS1Q96ST2 819 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 CCDC68Q9H2F9 335 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 UBAP1Q9NZ09 502 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 CLIP2Q9UDT6 1046 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 RSPH14Q9UHP6 348 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 ANLNQ9NQW6 1124 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 USP25Q9UHP3 1055 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 FAF1Q9UNN5 650 aaPredicted RBP8.99□□□□□ -0.97
LINC00649-203ENST00000427447 BICDL2A1A5D9 508 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 MSANTD4Q8NCY6 345 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 ZBTB41Q5SVQ8 909 aa8.99□□□□□ -0.97
LINC00649-203ENST00000427447 TSPY2A6NKD2 308 aa8.98□□□□□ -0.97
LINC00649-203ENST00000427447 TSPY3P0CV98 308 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms