RNA–Protein interactions for RNA: ENST00000426911.2

SRRM1P3-201, Transcript of serine/arginine repetitive matrix 1 pseudogene 3, humanhuman

BASIC

Gene SRRM1P3, Length 2,678 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1P3-201ENST00000426911 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
SRRM1P3-201ENST00000426911 PIGBQ92521 554 aa7.64□□□□□ -1.19
SRRM1P3-201ENST00000426911 PRKRIP1Q9H875 184 aaPredicted RBP7.64□□□□□ -1.19
SRRM1P3-201ENST00000426911 LGR6Q9HBX8 967 aa7.64□□□□□ -1.19
SRRM1P3-201ENST00000426911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.64□□□□□ -1.19
SRRM1P3-201ENST00000426911 CCDC184Q52MB2 194 aa7.63□□□□□ -1.19
SRRM1P3-201ENST00000426911 NKX1-1Q15270 411 aaPredicted RBP7.63□□□□□ -1.19
SRRM1P3-201ENST00000426911 RSPH6AQ9H0K4 717 aa7.63□□□□□ -1.19
SRRM1P3-201ENST00000426911 ASAP1Q9ULH1 1129 aa7.63□□□□□ -1.19
SRRM1P3-201ENST00000426911 KDM6AO15550 1401 aaPredicted RBP7.63□□□□□ -1.19
SRRM1P3-201ENST00000426911 SENP3-EIF4A1A0A087X0R7 540 aa7.62□□□□□ -1.19
SRRM1P3-201ENST00000426911 RALBP1Q15311 655 aa7.62□□□□□ -1.19
SRRM1P3-201ENST00000426911 AMOTQ4VCS5 1084 aa7.62□□□□□ -1.19
SRRM1P3-201ENST00000426911 C1orf141Q5JVX7 400 aa7.62□□□□□ -1.19
SRRM1P3-201ENST00000426911 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
SRRM1P3-201ENST00000426911 MYBBP1AQ9BQG0 1328 aaKnown RBP7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 ITGB4P16144 1822 aa7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 TMOD3Q9NYL9 352 aa7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 NUDCQ9Y266 331 aa7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 NUP188Q5SRE5 1749 aa7.61□□□□□ -1.19
SRRM1P3-201ENST00000426911 RREB1Q92766 1687 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 FXR2P51116 673 aaKnown RBP eCLIP7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 DCTN1Q14203 1278 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 ZNF827Q17R98 1081 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 DCAF5Q96JK2 942 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 GOLGB1Q14789 3259 aaKnown RBP7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 CABP4P57796 275 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 SLC39A6Q13433 755 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 AKAP4Q5JQC9 854 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 ATG3Q9NT62 314 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 CCNL1Q9UK58 526 aaPredicted RBP7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 PALLDQ8WX93 1383 aa7.6□□□□□ -1.19
SRRM1P3-201ENST00000426911 PTCD1O75127 700 aaKnown RBP7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 CCDC146Q8IYE0 955 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 UTRNP46939 3433 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 RNMTO43148 476 aaKnown RBP7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 PRR29P0C7W0 189 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 MCM10Q7L590 875 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 AMIGO3Q86WK7 504 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
SRRM1P3-201ENST00000426911 FCHSD2O94868 740 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 ITPK1Q13572 414 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 NBPF14Q5TI25 921 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 ERVV-2B6SEH9 535 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 HSP90AB1P08238 724 aaKnown RBP7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 SLC15A2Q16348 729 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 THUMPD2Q9BTF0 503 aaKnown RBP7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 ADAMTS8Q9UP79 889 aa7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 RRP7AQ9Y3A4 280 aaKnown RBP7.58□□□□□ -1.2
SRRM1P3-201ENST00000426911 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 GNAT3A8MTJ3 354 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 ZBTB7AO95365 584 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 PRKAR2AP13861 404 aaKnown RBP7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 SIK1P57059 783 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 NEUROD2Q15784 382 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 SLC52A2Q9HAB3 445 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 STK32BQ9NY57 414 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 MAP3K5Q99683 1374 aa7.57□□□□□ -1.2
SRRM1P3-201ENST00000426911 KCNQ3O43525 872 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 ATP6V1AP38606 617 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 SLC27A3Q5K4L6 730 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 MIS18AQ9NYP9 233 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 LY75O60449 1722 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 RGPD3A6NKT7 1758 aaPredicted RBP7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 RGPD4Q7Z3J3 1758 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 SCN11AQ9UI33 1791 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 ANP32CO43423 234 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 TFCP2L1Q9NZI6 479 aa7.56□□□□□ -1.2
SRRM1P3-201ENST00000426911 PHF14O94880 888 aa7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 SMARCC1Q92922 1105 aaPredicted RBP7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 PAPPAQ13219 1627 aa7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 VIRMAQ69YN4 1812 aaKnown RBP7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 TEFQ10587 303 aa7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 WDR43Q15061 677 aaKnown RBP eCLIP7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 PLEKHG2Q9H7P9 1386 aa7.55□□□□□ -1.2
SRRM1P3-201ENST00000426911 PNPLA7Q6ZV29 1317 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 COL23A1Q86Y22 540 aaPredicted RBP7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 DNAJC10Q8IXB1 793 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 MRS2Q9HD23 443 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 MAPK8IP3Q9UPT6 1336 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 PRAMEF22A3QJZ6 481 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 NFE2L2Q16236 605 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 MSL1Q68DK7 614 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 CEMIPQ8WUJ3 1361 aa7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 RTF1Q92541 710 aaKnown RBP7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 ZNF496Q96IT1 587 aaPredicted RBP7.54□□□□□ -1.2
SRRM1P3-201ENST00000426911 DLG5Q8TDM6 1919 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 GNPATO15228 680 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 NEFMP07197 916 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 TMPOP42166 694 aaKnown RBP7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 RIPK4P57078 832 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 TAF1LQ8IZX4 1826 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 TUBGCP6Q96RT7 1819 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 C5P01031 1676 aa7.53□□□□□ -1.2
SRRM1P3-201ENST00000426911 ADAMTS7Q9UKP4 1686 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms