RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 SLC39A6Q13433 755 aa16.58■□□□□ 0.25
SMIM12-203ENST00000426886 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.25
SMIM12-203ENST00000426886 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.25
SMIM12-203ENST00000426886 TEFQ10587 303 aa16.58■□□□□ 0.24
SMIM12-203ENST00000426886 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
SMIM12-203ENST00000426886 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
SMIM12-203ENST00000426886 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
SMIM12-203ENST00000426886 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
SMIM12-203ENST00000426886 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
SMIM12-203ENST00000426886 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
SMIM12-203ENST00000426886 RIPK4P57078 832 aa16.56■□□□□ 0.24
SMIM12-203ENST00000426886 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
SMIM12-203ENST00000426886 RUNDC1Q96C34 613 aa16.55■□□□□ 0.24
SMIM12-203ENST00000426886 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
SMIM12-203ENST00000426886 SIK1P57059 783 aa16.55■□□□□ 0.24
SMIM12-203ENST00000426886 ITGB4P16144 1822 aa16.54■□□□□ 0.24
SMIM12-203ENST00000426886 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
SMIM12-203ENST00000426886 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
SMIM12-203ENST00000426886 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
SMIM12-203ENST00000426886 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
SMIM12-203ENST00000426886 APAF1O14727 1248 aa16.53■□□□□ 0.24
SMIM12-203ENST00000426886 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
SMIM12-203ENST00000426886 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
SMIM12-203ENST00000426886 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
SMIM12-203ENST00000426886 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
SMIM12-203ENST00000426886 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
SMIM12-203ENST00000426886 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
SMIM12-203ENST00000426886 MIER1Q8N108 512 aa16.51■□□□□ 0.23
SMIM12-203ENST00000426886 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
SMIM12-203ENST00000426886 KCNQ3O43525 872 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 ITPK1Q13572 414 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 SMIM5Q71RC9 77 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 TTC5Q8N0Z6 440 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 TFCP2L1Q9NZI6 479 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 CEMIPQ8WUJ3 1361 aa16.5■□□□□ 0.23
SMIM12-203ENST00000426886 HTATSF1O43719 755 aaKnown RBP16.49■□□□□ 0.23
SMIM12-203ENST00000426886 SCN11AQ9UI33 1791 aa16.49■□□□□ 0.23
SMIM12-203ENST00000426886 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
SMIM12-203ENST00000426886 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
SMIM12-203ENST00000426886 LAS1LQ9Y4W2 734 aaKnown RBP16.48■□□□□ 0.23
SMIM12-203ENST00000426886 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
SMIM12-203ENST00000426886 RREB1Q92766 1687 aa16.47■□□□□ 0.23
SMIM12-203ENST00000426886 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
SMIM12-203ENST00000426886 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
SMIM12-203ENST00000426886 MSH5O43196 834 aa16.47■□□□□ 0.23
SMIM12-203ENST00000426886 ZNF496Q96IT1 587 aaPredicted RBP16.47■□□□□ 0.23
SMIM12-203ENST00000426886 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
SMIM12-203ENST00000426886 PHF14O94880 888 aa16.46■□□□□ 0.23
SMIM12-203ENST00000426886 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.22
SMIM12-203ENST00000426886 AK7Q96M32 723 aa16.46■□□□□ 0.22
SMIM12-203ENST00000426886 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
SMIM12-203ENST00000426886 AMIGO3Q86WK7 504 aa16.45■□□□□ 0.22
SMIM12-203ENST00000426886 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
SMIM12-203ENST00000426886 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
SMIM12-203ENST00000426886 MRC1P22897 1456 aa16.44■□□□□ 0.22
SMIM12-203ENST00000426886 GNPATO15228 680 aa16.44■□□□□ 0.22
SMIM12-203ENST00000426886 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
SMIM12-203ENST00000426886 LY75O60449 1722 aa16.44■□□□□ 0.22
SMIM12-203ENST00000426886 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
SMIM12-203ENST00000426886 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
SMIM12-203ENST00000426886 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
SMIM12-203ENST00000426886 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
SMIM12-203ENST00000426886 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
SMIM12-203ENST00000426886 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
SMIM12-203ENST00000426886 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
SMIM12-203ENST00000426886 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
SMIM12-203ENST00000426886 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
SMIM12-203ENST00000426886 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
SMIM12-203ENST00000426886 COL23A1Q86Y22 540 aaPredicted RBP16.41■□□□□ 0.22
SMIM12-203ENST00000426886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
SMIM12-203ENST00000426886 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
SMIM12-203ENST00000426886 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SMIM12-203ENST00000426886 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
SMIM12-203ENST00000426886 CYP19A1P11511 503 aaPredicted RBP16.39■□□□□ 0.21
SMIM12-203ENST00000426886 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
SMIM12-203ENST00000426886 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
SMIM12-203ENST00000426886 RTCBQ9Y3I0 505 aaKnown RBP16.39■□□□□ 0.21
SMIM12-203ENST00000426886 KCPQ6ZWJ8 1503 aa16.39■□□□□ 0.21
SMIM12-203ENST00000426886 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
SMIM12-203ENST00000426886 MSL1Q68DK7 614 aa16.38■□□□□ 0.21
SMIM12-203ENST00000426886 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
SMIM12-203ENST00000426886 STARD3NLO95772 234 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 A1BGP04217 495 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
SMIM12-203ENST00000426886 GTF3C3Q9Y5Q9 886 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 C5P01031 1676 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
SMIM12-203ENST00000426886 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
SMIM12-203ENST00000426886 EIF4A1P60842 406 aaKnown RBP16.37■□□□□ 0.21
SMIM12-203ENST00000426886 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
SMIM12-203ENST00000426886 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
SMIM12-203ENST00000426886 TRAPPC3LQ5T215 181 aa16.36■□□□□ 0.21
SMIM12-203ENST00000426886 ARXQ96QS3 562 aa16.36■□□□□ 0.21
SMIM12-203ENST00000426886 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
SMIM12-203ENST00000426886 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
SMIM12-203ENST00000426886 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
SMIM12-203ENST00000426886 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
SMIM12-203ENST00000426886 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
SMIM12-203ENST00000426886 CHL1O00533 1208 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms