RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 GLRX3O76003 335 aaKnown RBP16.56■□□□□ 0.24
RPL28-202ENST00000426763 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
RPL28-202ENST00000426763 GCP02774 474 aa16.55■□□□□ 0.24
RPL28-202ENST00000426763 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
RPL28-202ENST00000426763 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
RPL28-202ENST00000426763 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
RPL28-202ENST00000426763 ZFYVE9O95405 1425 aa16.55■□□□□ 0.24
RPL28-202ENST00000426763 DDB1Q16531 1140 aa16.55■□□□□ 0.24
RPL28-202ENST00000426763 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
RPL28-202ENST00000426763 IL2RBP14784 551 aa16.55■□□□□ 0.24
RPL28-202ENST00000426763 MX1P20591 662 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 GPTP24298 496 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 CCDC69A6NI79 296 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 KDM4AO75164 1064 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 ZSCAN29Q8IWY8 852 aaPredicted RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 AIDAQ96BJ3 306 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 TMOD2Q9NZR1 351 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 SASS6Q6UVJ0 657 aa16.54■□□□□ 0.24
RPL28-202ENST00000426763 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
RPL28-202ENST00000426763 TRIM22Q8IYM9 498 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 KRT32Q14532 448 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 PPP1R42Q7Z4L9 355 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 SLC5A1P13866 664 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 TRIM27P14373 513 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
RPL28-202ENST00000426763 STK11IPQ8N1F8 1099 aa16.53■□□□□ 0.24
RPL28-202ENST00000426763 NOC3LQ8WTT2 800 aaKnown RBP16.53■□□□□ 0.24
RPL28-202ENST00000426763 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
RPL28-202ENST00000426763 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
RPL28-202ENST00000426763 PCMTD1Q96MG8 357 aaPredicted RBP16.52■□□□□ 0.24
RPL28-202ENST00000426763 RFC4P35249 363 aa16.52■□□□□ 0.24
RPL28-202ENST00000426763 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
RPL28-202ENST00000426763 AEBP1Q8IUX7 1158 aa16.52■□□□□ 0.23
RPL28-202ENST00000426763 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.23
RPL28-202ENST00000426763 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 CHD1O14646 1710 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
RPL28-202ENST00000426763 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
RPL28-202ENST00000426763 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
RPL28-202ENST00000426763 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
RPL28-202ENST00000426763 IP6K1Q92551 441 aa16.5■□□□□ 0.23
RPL28-202ENST00000426763 ZNF396Q96N95 335 aaPredicted RBP16.5■□□□□ 0.23
RPL28-202ENST00000426763 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
RPL28-202ENST00000426763 ACSBG1Q96GR2 724 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 ATP2B1P20020 1258 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
RPL28-202ENST00000426763 HOXC9P31274 260 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
RPL28-202ENST00000426763 MTHFSDQ2M296 383 aaKnown RBP16.48■□□□□ 0.23
RPL28-202ENST00000426763 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 MAP3K12Q12852 859 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 STK3Q13188 491 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 UBE3BQ7Z3V4 1068 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 JAKMIP1Q96N16 626 aaKnown RBP16.48■□□□□ 0.23
RPL28-202ENST00000426763 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 CDKL5O76039 1030 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
RPL28-202ENST00000426763 SDF4Q9BRK5 362 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
RPL28-202ENST00000426763 GSE1Q14687 1217 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 ARHGAP45Q92619 1136 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
RPL28-202ENST00000426763 TXLNAP40222 546 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
RPL28-202ENST00000426763 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 IPO7O95373 1038 aaKnown RBP16.47■□□□□ 0.23
RPL28-202ENST00000426763 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 SOGA3Q5TF21 947 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 ZSCAN31Q96LW9 406 aaPredicted RBP16.47■□□□□ 0.23
RPL28-202ENST00000426763 EYA1Q99502 592 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
RPL28-202ENST00000426763 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
RPL28-202ENST00000426763 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
RPL28-202ENST00000426763 USP5P45974 858 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 LDHAL6AQ6ZMR3 332 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 DCAF5Q96JK2 942 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
RPL28-202ENST00000426763 ANXA1P04083 346 aa16.46■□□□□ 0.22
RPL28-202ENST00000426763 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.22
RPL28-202ENST00000426763 ST5P78524 1137 aa16.45■□□□□ 0.22
RPL28-202ENST00000426763 STK38Q15208 465 aa16.45■□□□□ 0.22
RPL28-202ENST00000426763 ORAI2Q96SN7 254 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms