RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 CYP46A1Q9Y6A2 500 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 ZBTB7BO15156 539 aaPredicted RBP12.72□□□□□ -0.37
LINC02554-201ENST00000426467 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
LINC02554-201ENST00000426467 SPHKAPQ2M3C7 1700 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
LINC02554-201ENST00000426467 CHL1O00533 1208 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.37
LINC02554-201ENST00000426467 MBD3O95983 291 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 IP6K1Q92551 441 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
LINC02554-201ENST00000426467 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.37
LINC02554-201ENST00000426467 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 MYD88Q99836 296 aa12.71□□□□□ -0.37
LINC02554-201ENST00000426467 PDCP20941 246 aa12.71□□□□□ -0.38
LINC02554-201ENST00000426467 DCTPP1Q9H773 170 aa12.71□□□□□ -0.38
LINC02554-201ENST00000426467 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.38
LINC02554-201ENST00000426467 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.38
LINC02554-201ENST00000426467 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
LINC02554-201ENST00000426467 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
LINC02554-201ENST00000426467 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 CCDC158Q5M9N0 1113 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 BICD2Q8TD16 824 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
LINC02554-201ENST00000426467 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
LINC02554-201ENST00000426467 CNNM1Q9NRU3 951 aa12.69□□□□□ -0.38
LINC02554-201ENST00000426467 TPM4P67936 248 aa12.69□□□□□ -0.38
LINC02554-201ENST00000426467 E9PCH4 1651 aa12.69□□□□□ -0.38
LINC02554-201ENST00000426467 TSPOAP1O95153 1857 aa12.69□□□□□ -0.38
LINC02554-201ENST00000426467 AKAP17AQ02040 695 aaKnown RBP12.68□□□□□ -0.38
LINC02554-201ENST00000426467 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 SDSP20132 328 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 STARD3NLO95772 234 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 WDR33Q9C0J8 1336 aaKnown RBP12.68□□□□□ -0.38
LINC02554-201ENST00000426467 SEC24BO95487 1268 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 MADDQ8WXG6 1647 aa12.68□□□□□ -0.38
LINC02554-201ENST00000426467 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 JAKMIP1Q96N16 626 aaKnown RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 A0A087WZG4 1122 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 PDE1AP54750 535 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 TRIM29Q14134 588 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 MSH6P52701 1360 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 ECHDC1Q9NTX5 307 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 NASPP49321 788 aaPredicted RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
LINC02554-201ENST00000426467 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
LINC02554-201ENST00000426467 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 CCDC8Q9H0W5 538 aaPredicted RBP12.66□□□□□ -0.38
LINC02554-201ENST00000426467 ATP7BP35670 1465 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 BECN2A8MW95 431 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 G3V3G9 751 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 GOLGA6L19H0YKK7 550 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 AATKQ6ZMQ8 1374 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 G2E3Q7L622 706 aa12.66□□□□□ -0.38
LINC02554-201ENST00000426467 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
LINC02554-201ENST00000426467 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
LINC02554-201ENST00000426467 FIBPO43427 364 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
LINC02554-201ENST00000426467 FOSBP53539 338 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC02554-201ENST00000426467 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 KSR2Q6VAB6 950 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 CCDC85AQ96PX6 553 aaPredicted RBP12.65□□□□□ -0.38
LINC02554-201ENST00000426467 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
LINC02554-201ENST00000426467 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
LINC02554-201ENST00000426467 ROBO2Q9HCK4 1378 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 ERICH2A1L162 156 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 KRT32Q14532 448 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
LINC02554-201ENST00000426467 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
LINC02554-201ENST00000426467 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms