RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 PLCB2Q00722 1185 aa19.53■□□□□ 0.72
PKP4-205ENST00000426248 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
PKP4-205ENST00000426248 C8orf58Q8NAV2 365 aa19.53■□□□□ 0.72
PKP4-205ENST00000426248 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
PKP4-205ENST00000426248 AIMP1Q12904 312 aaKnown RBP19.53■□□□□ 0.72
PKP4-205ENST00000426248 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
PKP4-205ENST00000426248 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
PKP4-205ENST00000426248 TBC1D32Q96NH3 1257 aa19.52■□□□□ 0.72
PKP4-205ENST00000426248 TOM1O60784 492 aa19.52■□□□□ 0.72
PKP4-205ENST00000426248 API5Q9BZZ5 524 aaKnown RBP19.52■□□□□ 0.72
PKP4-205ENST00000426248 DDX19BQ9UMR2 479 aa19.52■□□□□ 0.72
PKP4-205ENST00000426248 DIP2AQ14689 1571 aa19.52■□□□□ 0.71
PKP4-205ENST00000426248 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
PKP4-205ENST00000426248 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
PKP4-205ENST00000426248 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
PKP4-205ENST00000426248 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
PKP4-205ENST00000426248 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
PKP4-205ENST00000426248 CGNQ9P2M7 1197 aaKnown RBP19.5■□□□□ 0.71
PKP4-205ENST00000426248 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
PKP4-205ENST00000426248 PDZRN3Q9UPQ7 1066 aa19.5■□□□□ 0.71
PKP4-205ENST00000426248 ARHGEF25Q86VW2 580 aa19.5■□□□□ 0.71
PKP4-205ENST00000426248 RNF214Q8ND24 703 aa19.5■□□□□ 0.71
PKP4-205ENST00000426248 USP19O94966 1318 aa19.5■□□□□ 0.71
PKP4-205ENST00000426248 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
PKP4-205ENST00000426248 CSPP1Q1MSJ5 1256 aa19.49■□□□□ 0.71
PKP4-205ENST00000426248 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
PKP4-205ENST00000426248 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
PKP4-205ENST00000426248 CABP4P57796 275 aa19.49■□□□□ 0.71
PKP4-205ENST00000426248 PPP4R3BQ5MIZ7 849 aa19.49■□□□□ 0.71
PKP4-205ENST00000426248 IL16Q14005 1332 aa19.48■□□□□ 0.71
PKP4-205ENST00000426248 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
PKP4-205ENST00000426248 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
PKP4-205ENST00000426248 CCDC30Q5VVM6 783 aa19.48■□□□□ 0.71
PKP4-205ENST00000426248 CDC42BPGQ6DT37 1551 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 TRIM27P14373 513 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 MED14O60244 1454 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 MYOM1P52179 1685 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 INSRP06213 1382 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 C1orf167Q5SNV9 1468 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 TSC1Q92574 1164 aa19.47■□□□□ 0.71
PKP4-205ENST00000426248 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
PKP4-205ENST00000426248 AXIN2Q9Y2T1 843 aa19.46■□□□□ 0.71
PKP4-205ENST00000426248 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
PKP4-205ENST00000426248 OS9Q13438 667 aaPredicted RBP19.46■□□□□ 0.71
PKP4-205ENST00000426248 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
PKP4-205ENST00000426248 PAXIP1Q6ZW49 1069 aaPredicted RBP19.46■□□□□ 0.71
PKP4-205ENST00000426248 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
PKP4-205ENST00000426248 FOXD4L5Q5VV16 416 aaPredicted RBP19.45■□□□□ 0.7
PKP4-205ENST00000426248 FOXD4L4Q8WXT5 416 aaPredicted RBP19.45■□□□□ 0.7
PKP4-205ENST00000426248 PTCD1O75127 700 aaKnown RBP19.45■□□□□ 0.7
PKP4-205ENST00000426248 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
PKP4-205ENST00000426248 NRXN3Q9Y4C0 1643 aa19.45■□□□□ 0.7
PKP4-205ENST00000426248 DYNC1I1O14576 645 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 MVPQ14764 893 aaKnown RBP19.44■□□□□ 0.7
PKP4-205ENST00000426248 ANXA1P04083 346 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 F6X3S4 739 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
PKP4-205ENST00000426248 VAMP4O75379 141 aa19.43■□□□□ 0.7
PKP4-205ENST00000426248 RLBP1P12271 317 aa19.43■□□□□ 0.7
PKP4-205ENST00000426248 PTMSP20962 102 aa19.43■□□□□ 0.7
PKP4-205ENST00000426248 NGLY1Q96IV0 654 aa19.43■□□□□ 0.7
PKP4-205ENST00000426248 CDK12Q9NYV4 1490 aaPredicted RBP19.42■□□□□ 0.7
PKP4-205ENST00000426248 MYL6BP14649 208 aa19.42■□□□□ 0.7
PKP4-205ENST00000426248 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
PKP4-205ENST00000426248 CCDC94Q9BW85 323 aaPredicted RBP19.42■□□□□ 0.7
PKP4-205ENST00000426248 SASS6Q6UVJ0 657 aa19.42■□□□□ 0.7
PKP4-205ENST00000426248 IFNL2Q8IZJ0 200 aa19.42■□□□□ 0.7
PKP4-205ENST00000426248 RBM42Q9BTD8 480 aaKnown RBP19.42■□□□□ 0.7
PKP4-205ENST00000426248 IGSF1Q8N6C5 1336 aa19.41■□□□□ 0.7
PKP4-205ENST00000426248 ARHGEF10O15013 1369 aa19.41■□□□□ 0.7
PKP4-205ENST00000426248 ANKRD45Q5TZF3 282 aa19.41■□□□□ 0.7
PKP4-205ENST00000426248 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
PKP4-205ENST00000426248 AKAP4Q5JQC9 854 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 ADAMTSL3P82987 1691 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 ALDH1L2Q3SY69 923 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 OVOS2A0A0J9YW53 1432 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 OVOS2Q6IE36 1432 aa19.4■□□□□ 0.7
PKP4-205ENST00000426248 NFATC2IPQ8NCF5 419 aa19.39■□□□□ 0.69
PKP4-205ENST00000426248 IL17REQ8NFR9 667 aa19.39■□□□□ 0.69
PKP4-205ENST00000426248 DMTNQ08495 405 aa19.39■□□□□ 0.69
PKP4-205ENST00000426248 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
PKP4-205ENST00000426248 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
PKP4-205ENST00000426248 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
PKP4-205ENST00000426248 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
PKP4-205ENST00000426248 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
PKP4-205ENST00000426248 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
PKP4-205ENST00000426248 SSFA2P28290 1259 aa19.37■□□□□ 0.69
PKP4-205ENST00000426248 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
PKP4-205ENST00000426248 C8orf37Q96NL8 207 aa19.37■□□□□ 0.69
PKP4-205ENST00000426248 CHAF1AQ13111 956 aaPredicted RBP19.37■□□□□ 0.69
PKP4-205ENST00000426248 LNPKQ9C0E8 428 aa19.37■□□□□ 0.69
PKP4-205ENST00000426248 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
PKP4-205ENST00000426248 CHL1O00533 1208 aa19.36■□□□□ 0.69
PKP4-205ENST00000426248 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
PKP4-205ENST00000426248 ERBB3P21860 1342 aa19.36■□□□□ 0.69
PKP4-205ENST00000426248 LARP1Q6PKG0 1096 aaKnown RBP19.35■□□□□ 0.69
PKP4-205ENST00000426248 CCDC39Q9UFE4 941 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms