RNA–Protein interactions for RNA: ENST00000425118.5

AUP1-202, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 1 (best)

Gene AUP1, Length 1,581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-202ENST00000425118 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
AUP1-202ENST00000425118 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
AUP1-202ENST00000425118 RBM42Q9BTD8 480 aaKnown RBP22.53■■□□□ 1.2
AUP1-202ENST00000425118 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
AUP1-202ENST00000425118 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
AUP1-202ENST00000425118 TEFQ10587 303 aa22.51■■□□□ 1.19
AUP1-202ENST00000425118 DIEXFQ68CQ4 756 aaKnown RBP22.51■■□□□ 1.19
AUP1-202ENST00000425118 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
AUP1-202ENST00000425118 THUMPD2Q9BTF0 503 aaKnown RBP22.5■■□□□ 1.19
AUP1-202ENST00000425118 LOC102724428A0A0B4J2F2 783 aa22.5■■□□□ 1.19
AUP1-202ENST00000425118 SIK1P57059 783 aa22.5■■□□□ 1.19
AUP1-202ENST00000425118 RIPK4P57078 832 aa22.5■■□□□ 1.19
AUP1-202ENST00000425118 SLC27A3Q5K4L6 730 aa22.5■■□□□ 1.19
AUP1-202ENST00000425118 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
AUP1-202ENST00000425118 RUNDC1Q96C34 613 aa22.49■■□□□ 1.19
AUP1-202ENST00000425118 ATP6V1AP38606 617 aa22.48■■□□□ 1.19
AUP1-202ENST00000425118 TMPOP42166 694 aaKnown RBP22.47■■□□□ 1.19
AUP1-202ENST00000425118 ZNF827Q17R98 1081 aa22.47■■□□□ 1.19
AUP1-202ENST00000425118 FAM9BQ8IZU0 186 aa22.47■■□□□ 1.19
AUP1-202ENST00000425118 STK32BQ9NY57 414 aa22.47■■□□□ 1.19
AUP1-202ENST00000425118 SLC4A9Q96Q91 983 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 RREB1Q92766 1687 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 APAF1O14727 1248 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 SLC15A2Q16348 729 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
AUP1-202ENST00000425118 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
AUP1-202ENST00000425118 SCN11AQ9UI33 1791 aa22.45■■□□□ 1.18
AUP1-202ENST00000425118 ITPK1Q13572 414 aa22.45■■□□□ 1.18
AUP1-202ENST00000425118 BTBD11A6QL63 1104 aa22.44■■□□□ 1.18
AUP1-202ENST00000425118 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
AUP1-202ENST00000425118 CEMIPQ8WUJ3 1361 aa22.44■■□□□ 1.18
AUP1-202ENST00000425118 KCNQ3O43525 872 aa22.43■■□□□ 1.18
AUP1-202ENST00000425118 HTATSF1O43719 755 aaKnown RBP22.43■■□□□ 1.18
AUP1-202ENST00000425118 TFCP2L1Q9NZI6 479 aa22.43■■□□□ 1.18
AUP1-202ENST00000425118 RGPD3A6NKT7 1758 aaPredicted RBP22.43■■□□□ 1.18
AUP1-202ENST00000425118 RGPD4Q7Z3J3 1758 aa22.43■■□□□ 1.18
AUP1-202ENST00000425118 LINC00116Q8NCU8 138 aa22.42■■□□□ 1.18
AUP1-202ENST00000425118 TTC5Q8N0Z6 440 aa22.42■■□□□ 1.18
AUP1-202ENST00000425118 AKT1S1Q96B36 256 aa22.41■■□□□ 1.18
AUP1-202ENST00000425118 LY75O60449 1722 aa22.4■■□□□ 1.18
AUP1-202ENST00000425118 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
AUP1-202ENST00000425118 MIER1Q8N108 512 aa22.4■■□□□ 1.18
AUP1-202ENST00000425118 MRC1P22897 1456 aa22.39■■□□□ 1.18
AUP1-202ENST00000425118 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.18
AUP1-202ENST00000425118 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
AUP1-202ENST00000425118 TAF7Q15545 349 aaPredicted RBP22.38■■□□□ 1.17
AUP1-202ENST00000425118 TRIM35Q9UPQ4 493 aa22.38■■□□□ 1.17
AUP1-202ENST00000425118 MSH5O43196 834 aa22.38■■□□□ 1.17
AUP1-202ENST00000425118 PHF14O94880 888 aa22.38■■□□□ 1.17
AUP1-202ENST00000425118 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
AUP1-202ENST00000425118 ZNF496Q96IT1 587 aaPredicted RBP22.38■■□□□ 1.17
AUP1-202ENST00000425118 AK7Q96M32 723 aa22.38■■□□□ 1.17
AUP1-202ENST00000425118 ADAMTS7Q9UKP4 1686 aa22.37■■□□□ 1.17
AUP1-202ENST00000425118 DNAJC10Q8IXB1 793 aa22.37■■□□□ 1.17
AUP1-202ENST00000425118 LAS1LQ9Y4W2 734 aaKnown RBP22.37■■□□□ 1.17
AUP1-202ENST00000425118 DLG5Q8TDM6 1919 aa22.36■■□□□ 1.17
AUP1-202ENST00000425118 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
AUP1-202ENST00000425118 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
AUP1-202ENST00000425118 GNPATO15228 680 aa22.34■■□□□ 1.17
AUP1-202ENST00000425118 PNPLA7Q6ZV29 1317 aa22.33■■□□□ 1.17
AUP1-202ENST00000425118 PAPPAQ13219 1627 aa22.33■■□□□ 1.17
AUP1-202ENST00000425118 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.16
AUP1-202ENST00000425118 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.16
AUP1-202ENST00000425118 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.16
AUP1-202ENST00000425118 CRKLP46109 303 aaKnown RBP22.31■■□□□ 1.16
AUP1-202ENST00000425118 COL23A1Q86Y22 540 aaPredicted RBP22.31■■□□□ 1.16
AUP1-202ENST00000425118 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
AUP1-202ENST00000425118 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
AUP1-202ENST00000425118 C5P01031 1676 aa22.31■■□□□ 1.16
AUP1-202ENST00000425118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.29■■□□□ 1.16
AUP1-202ENST00000425118 HEG1Q9ULI3 1381 aa22.29■■□□□ 1.16
AUP1-202ENST00000425118 CCER2I3L3R5 266 aa22.29■■□□□ 1.16
AUP1-202ENST00000425118 CYP19A1P11511 503 aaPredicted RBP22.29■■□□□ 1.16
AUP1-202ENST00000425118 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
AUP1-202ENST00000425118 SIPA1L3O60292 1781 aaPredicted RBP22.28■■□□□ 1.16
AUP1-202ENST00000425118 TAF1LQ8IZX4 1826 aa22.27■■□□□ 1.16
AUP1-202ENST00000425118 INTS5Q6P9B9 1019 aaKnown RBP22.27■■□□□ 1.16
AUP1-202ENST00000425118 VSIG10Q8N0Z9 540 aa22.27■■□□□ 1.16
AUP1-202ENST00000425118 RTCBQ9Y3I0 505 aaKnown RBP22.27■■□□□ 1.16
AUP1-202ENST00000425118 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
AUP1-202ENST00000425118 HMGB2P26583 209 aaKnown RBP22.26■■□□□ 1.15
AUP1-202ENST00000425118 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
AUP1-202ENST00000425118 PIP4K2AP48426 406 aaPredicted RBP22.26■■□□□ 1.15
AUP1-202ENST00000425118 MSL1Q68DK7 614 aa22.26■■□□□ 1.15
AUP1-202ENST00000425118 STARD3NLO95772 234 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
AUP1-202ENST00000425118 CCDC87Q9NVE4 849 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 ZNF330Q9Y3S2 320 aaPredicted RBP22.25■■□□□ 1.15
AUP1-202ENST00000425118 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 A1BGP04217 495 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
AUP1-202ENST00000425118 TRAPPC3LQ5T215 181 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 RC3H1Q5TC82 1133 aaKnown RBP22.25■■□□□ 1.15
AUP1-202ENST00000425118 ZBTB1Q9Y2K1 713 aa22.25■■□□□ 1.15
AUP1-202ENST00000425118 RPS6KA4O75676 772 aa22.24■■□□□ 1.15
AUP1-202ENST00000425118 WWC1Q8IX03 1113 aa22.24■■□□□ 1.15
AUP1-202ENST00000425118 SSFA2P28290 1259 aa22.23■■□□□ 1.15
AUP1-202ENST00000425118 KRT24Q2M2I5 525 aa22.23■■□□□ 1.15
AUP1-202ENST00000425118 ARHGEF1Q92888 912 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms