RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 ANKRD44Q8N8A2 993 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 SPATA32Q96LK8 384 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 MYD88Q99836 296 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 GIMAP6Q6P9H5 292 aa12.18□□□□□ -0.46
VPS37A-202ENST00000425020 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
VPS37A-202ENST00000425020 PHAXQ9H814 394 aaKnown RBP12.18□□□□□ -0.46
VPS37A-202ENST00000425020 CABP4P57796 275 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
VPS37A-202ENST00000425020 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 CCDC192P0DO97 292 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 PDCP20941 246 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
VPS37A-202ENST00000425020 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 VPS37DQ86XT2 251 aa12.17□□□□□ -0.46
VPS37A-202ENST00000425020 STK38Q15208 465 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 GLRX3O76003 335 aaKnown RBP12.16□□□□□ -0.46
VPS37A-202ENST00000425020 PIBF1Q8WXW3 757 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 ABCC10Q5T3U5 1492 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
VPS37A-202ENST00000425020 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 KLHL40Q2TBA0 621 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
VPS37A-202ENST00000425020 IL16Q14005 1332 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 DENND4BO75064 1496 aaPredicted RBP12.15□□□□□ -0.46
VPS37A-202ENST00000425020 ARHGEF12Q9NZN5 1544 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 PKP1Q13835 747 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 NUP62CLQ9H1M0 184 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
VPS37A-202ENST00000425020 CWF19L2Q2TBE0 894 aaKnown RBP12.15□□□□□ -0.47
VPS37A-202ENST00000425020 ERC1Q8IUD2 1116 aa12.15□□□□□ -0.47
VPS37A-202ENST00000425020 ISM2Q6H9L7 571 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 NUP160Q12769 1436 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 GJB2P29033 226 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 HAND2P61296 217 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
VPS37A-202ENST00000425020 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 ZMYM4Q5VZL5 1548 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 FAM173BQ6P4H8 233 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 ZBTB9Q96C00 473 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 EYA1Q99502 592 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 LIMCH1Q9UPQ0 1083 aa12.14□□□□□ -0.47
VPS37A-202ENST00000425020 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
VPS37A-202ENST00000425020 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 IDH1O75874 414 aaKnown RBP12.13□□□□□ -0.47
VPS37A-202ENST00000425020 CD2BP2O95400 341 aaKnown RBP12.13□□□□□ -0.47
VPS37A-202ENST00000425020 DDX46Q7L014 1031 aaKnown RBP12.13□□□□□ -0.47
VPS37A-202ENST00000425020 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 BLMP54132 1417 aaPredicted RBP12.13□□□□□ -0.47
VPS37A-202ENST00000425020 STX6O43752 255 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 MARCH6O60337 910 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 TPM2P07951 284 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 RAB3GAP1Q15042 981 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 CCDC34Q96HJ3 373 aa12.13□□□□□ -0.47
VPS37A-202ENST00000425020 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
VPS37A-202ENST00000425020 NSD2O96028 1365 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 PTPRCP08575 1304 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 A0A087WZG4 1122 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 BIN1O00499 593 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
VPS37A-202ENST00000425020 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 PTPRTO14522 1441 aa12.12□□□□□ -0.47
VPS37A-202ENST00000425020 PNMA6EA0A0J9YXQ4 647 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 TPM3P06753 285 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 SKIDA1Q1XH10 827 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
VPS37A-202ENST00000425020 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
VPS37A-202ENST00000425020 CEP126Q9P2H0 1117 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 NDUFB9Q9Y6M9 179 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 ADCY5O95622 1261 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 NUP133Q8WUM0 1156 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 ADGRL2O95490 1459 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 DNM1Q05193 864 aaKnown RBP12.11□□□□□ -0.47
VPS37A-202ENST00000425020 MAP3K11Q16584 847 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 CHST3Q7LGC8 479 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms