RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PTPRMP28827 1452 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 MLECQ14165 292 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 VAMP4O75379 141 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 SRCIN1Q9C0H9 1055 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
SEC61A1-202ENST00000424880 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 CASC1Q6TDU7 716 aa13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 SYTL4Q96C24 671 aaPredicted RBP13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 SLC52A1Q9NWF4 448 aa13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 SRPK2P78362 688 aaKnown RBP13.59□□□□□ -0.23
SEC61A1-202ENST00000424880 PRKAR2BP31323 418 aa13.58□□□□□ -0.23
SEC61A1-202ENST00000424880 C8orf58Q8NAV2 365 aa13.58□□□□□ -0.23
SEC61A1-202ENST00000424880 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
SEC61A1-202ENST00000424880 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
SEC61A1-202ENST00000424880 ERC2O15083 957 aa13.58□□□□□ -0.24
SEC61A1-202ENST00000424880 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
SEC61A1-202ENST00000424880 TRIM6-TRIM34B2RNG4 842 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 REC8O95072 547 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 SETBP1Q9Y6X0 1596 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 PHF14O94880 888 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 CPA1P15085 419 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 FEZ1Q99689 392 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 STK26Q9P289 416 aa13.57□□□□□ -0.24
SEC61A1-202ENST00000424880 TNNT1P13805 278 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 CCDC183Q5T5S1 534 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 CTIFO43310 598 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 FAM173BQ6P4H8 233 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
SEC61A1-202ENST00000424880 CAPN2P17655 700 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 MX1P20591 662 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 GABPB1Q06547 395 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 TERF2Q15554 542 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 TWISTNBQ3B726 338 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 IL25Q9H293 177 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 TMEM131LA2VDJ0 1609 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 CHMP4CQ96CF2 233 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
SEC61A1-202ENST00000424880 ARID5BQ14865 1188 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 MEIS3Q99687 375 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 SLC4A10Q6U841 1118 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 TMX1Q9H3N1 280 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 DDX41Q9UJV9 622 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 MYO3AQ8NEV4 1616 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 KIF18AQ8NI77 898 aa13.54□□□□□ -0.24
SEC61A1-202ENST00000424880 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 ZNF142P52746 1687 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 TPD52L1Q16890 204 aaPredicted RBP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 USP27XA6NNY8 438 aa13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 DIAPH1O60610 1272 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
SEC61A1-202ENST00000424880 FERMT3Q86UX7 667 aa13.52□□□□□ -0.24
SEC61A1-202ENST00000424880 CCDC112Q8NEF3 446 aa13.52□□□□□ -0.24
SEC61A1-202ENST00000424880 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.24
SEC61A1-202ENST00000424880 UVSSAQ2YD98 709 aa13.52□□□□□ -0.24
SEC61A1-202ENST00000424880 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.24
SEC61A1-202ENST00000424880 UNC5CLQ8IV45 518 aa13.52□□□□□ -0.25
SEC61A1-202ENST00000424880 TIGD1Q96MW7 591 aa13.52□□□□□ -0.25
SEC61A1-202ENST00000424880 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 C3P01024 1663 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 A0A087WWV3 80 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 ELF2Q15723 593 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 DNAJC2Q99543 621 aaKnown RBP13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
SEC61A1-202ENST00000424880 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 F6X3S4 739 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 SYT1P21579 422 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
SEC61A1-202ENST00000424880 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 VPS37CA5D8V6 355 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 PDE1AP54750 535 aa13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 ABCC4O15439 1325 aa13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEC61A1-202ENST00000424880 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms