RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 TECPR2O15040 1411 aa17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 GNAI2P04899 355 aa17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 ANO2Q9NQ90 1003 aa17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 HAP1P54257 671 aaPredicted RBP17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
TPM3P9-201ENST00000424846 USP6P35125 1406 aa17.33■□□□□ 0.37
TPM3P9-201ENST00000424846 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.37
TPM3P9-201ENST00000424846 EYA1Q99502 592 aa17.33■□□□□ 0.37
TPM3P9-201ENST00000424846 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 DTNBO60941 627 aa17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 MX1P20591 662 aa17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 CHMLP26374 656 aa17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 PDLIM2Q96JY6 352 aa17.33■□□□□ 0.36
TPM3P9-201ENST00000424846 FLIIQ13045 1269 aa17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 MAP4K4O95819 1239 aaPredicted RBP17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 LRRCC1Q9C099 1032 aa17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 AGLP35573 1532 aa17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
TPM3P9-201ENST00000424846 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 MSNP26038 577 aaKnown RBP17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 OFD1O75665 1012 aa17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 BRD1O95696 1058 aa17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
TPM3P9-201ENST00000424846 LTKP29376 864 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 LRSAM1Q6UWE0 723 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 RRP9O43818 475 aaKnown RBP17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 GADD45BO75293 160 aaPredicted RBP17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 LARP6Q9BRS8 491 aaKnown RBP17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 PPP6R1Q9UPN7 881 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
TPM3P9-201ENST00000424846 CUL4AQ13619 759 aa17.29■□□□□ 0.36
TPM3P9-201ENST00000424846 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
TPM3P9-201ENST00000424846 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
TPM3P9-201ENST00000424846 ATP8B2P98198 1209 aa17.28■□□□□ 0.36
TPM3P9-201ENST00000424846 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
TPM3P9-201ENST00000424846 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
TPM3P9-201ENST00000424846 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
TPM3P9-201ENST00000424846 MPNDQ8N594 471 aa17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 NOL7Q9UMY1 257 aaKnown RBP17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 R3HCC1Q9Y3T6 440 aaKnown RBP17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 SSH2Q76I76 1423 aa17.27■□□□□ 0.36
TPM3P9-201ENST00000424846 TCHHQ07283 1943 aa17.27■□□□□ 0.35
TPM3P9-201ENST00000424846 RBM10P98175 930 aaKnown RBP17.27■□□□□ 0.35
TPM3P9-201ENST00000424846 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 AMPHP49418 695 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 PTPRUQ92729 1446 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 KDRP35968 1356 aa17.26■□□□□ 0.35
TPM3P9-201ENST00000424846 XRN1Q8IZH2 1706 aaKnown RBP17.25■□□□□ 0.35
TPM3P9-201ENST00000424846 IGSF1Q8N6C5 1336 aa17.25■□□□□ 0.35
TPM3P9-201ENST00000424846 TPM2P07951 284 aa17.25■□□□□ 0.35
TPM3P9-201ENST00000424846 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
TPM3P9-201ENST00000424846 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
TPM3P9-201ENST00000424846 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 GNAI3P08754 354 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 FLT4P35916 1363 aa17.24■□□□□ 0.35
TPM3P9-201ENST00000424846 TNRQ92752 1358 aa17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 CPA1P15085 419 aa17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
TPM3P9-201ENST00000424846 USP48Q86UV5 1035 aa17.22■□□□□ 0.35
TPM3P9-201ENST00000424846 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
TPM3P9-201ENST00000424846 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
TPM3P9-201ENST00000424846 MCCP23508 829 aa17.22■□□□□ 0.35
TPM3P9-201ENST00000424846 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
TPM3P9-201ENST00000424846 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 MBD3O95983 291 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 MCM2P49736 904 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
TPM3P9-201ENST00000424846 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 ANAPC15P60006 121 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 ANXA1P04083 346 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms