RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 TSPAN18Q96SJ8 248 aa10.55□□□□□ -0.72
VPS8-204ENST00000424463 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 ARHGEF1Q92888 912 aaKnown RBP10.54□□□□□ -0.72
VPS8-204ENST00000424463 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 CDK12Q9NYV4 1490 aaPredicted RBP10.54□□□□□ -0.72
VPS8-204ENST00000424463 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 RGPD8O14715 1765 aaPredicted RBP10.54□□□□□ -0.72
VPS8-204ENST00000424463 NLRP6P59044 892 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 MTA1Q13330 715 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 ANKRD23Q86SG2 305 aa10.54□□□□□ -0.72
VPS8-204ENST00000424463 BSDC1Q9NW68 430 aaPredicted RBP10.54□□□□□ -0.72
VPS8-204ENST00000424463 RLBP1P12271 317 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 TTC21AQ8NDW8 1320 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 FAM83GA6ND36 823 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
VPS8-204ENST00000424463 USP31Q70CQ4 1352 aa10.52□□□□□ -0.72
VPS8-204ENST00000424463 IL16Q14005 1332 aa10.52□□□□□ -0.72
VPS8-204ENST00000424463 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
VPS8-204ENST00000424463 SDR16C5Q8N3Y7 309 aa10.52□□□□□ -0.73
VPS8-204ENST00000424463 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.73
VPS8-204ENST00000424463 NPHP4O75161 1426 aaPredicted RBP10.52□□□□□ -0.73
VPS8-204ENST00000424463 ZKSCAN8Q15776 578 aaPredicted RBP10.52□□□□□ -0.73
VPS8-204ENST00000424463 ABTB2Q8N961 1025 aa10.52□□□□□ -0.73
VPS8-204ENST00000424463 PHF8Q9UPP1 1060 aa10.52□□□□□ -0.73
VPS8-204ENST00000424463 KDM2BQ8NHM5 1336 aa10.51□□□□□ -0.73
VPS8-204ENST00000424463 POLD1P28340 1107 aa10.51□□□□□ -0.73
VPS8-204ENST00000424463 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
VPS8-204ENST00000424463 SSH1Q8WYL5 1049 aa10.51□□□□□ -0.73
VPS8-204ENST00000424463 MKL1Q969V6 931 aa10.51□□□□□ -0.73
VPS8-204ENST00000424463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS8-204ENST00000424463 ANKARQ7Z5J8 1434 aa10.5□□□□□ -0.73
VPS8-204ENST00000424463 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
VPS8-204ENST00000424463 IGHDP01880 384 aa10.5□□□□□ -0.73
VPS8-204ENST00000424463 AMPHP49418 695 aa10.5□□□□□ -0.73
VPS8-204ENST00000424463 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
VPS8-204ENST00000424463 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
VPS8-204ENST00000424463 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
VPS8-204ENST00000424463 ORAI2Q96SN7 254 aa10.5□□□□□ -0.73
VPS8-204ENST00000424463 CHD2O14647 1828 aaKnown RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 CT47A1Q5JQC4 288 aaPredicted RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 PROSER2Q86WR7 435 aaPredicted RBP10.49□□□□□ -0.73
VPS8-204ENST00000424463 PEAK1Q9H792 1746 aa10.49□□□□□ -0.73
VPS8-204ENST00000424463 PSME1Q06323 249 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 CENPQQ7L2Z9 268 aaPredicted RBP10.48□□□□□ -0.73
VPS8-204ENST00000424463 MTERF4Q7Z6M4 381 aaKnown RBP10.48□□□□□ -0.73
VPS8-204ENST00000424463 TSPYL6Q8N831 410 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 NOB1Q9ULX3 412 aaKnown RBP10.48□□□□□ -0.73
VPS8-204ENST00000424463 CEP83Q9Y592 693 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 RPS6KL1Q9Y6S9 549 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
VPS8-204ENST00000424463 SCP2P22307 547 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 MBIPQ9NS73 344 aa10.48□□□□□ -0.73
VPS8-204ENST00000424463 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
VPS8-204ENST00000424463 SETDB1Q15047 1291 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 MCM10Q7L590 875 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
VPS8-204ENST00000424463 EYA1Q99502 592 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 FMN2Q9NZ56 1722 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 FOXO3O43524 673 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 ZNF853P0CG23 659 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
VPS8-204ENST00000424463 SBNO1A3KN83 1393 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 TRIM27P14373 513 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 HSPA2P54652 639 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 GNAI1P63096 354 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.73
VPS8-204ENST00000424463 DZIP1LQ8IYY4 767 aaKnown RBP10.46□□□□□ -0.73
VPS8-204ENST00000424463 IFT57Q9NWB7 429 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 PCDHB15Q9Y5E8 787 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 ADGRL3Q9HAR2 1447 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 PIK3C2AO00443 1686 aa10.46□□□□□ -0.73
VPS8-204ENST00000424463 FLT4P35916 1363 aa10.46□□□□□ -0.74
VPS8-204ENST00000424463 VAMP4O75379 141 aa10.46□□□□□ -0.74
VPS8-204ENST00000424463 HOXC9P31274 260 aa10.46□□□□□ -0.74
VPS8-204ENST00000424463 C8orf58Q8NAV2 365 aa10.46□□□□□ -0.74
VPS8-204ENST00000424463 ZBTB9Q96C00 473 aa10.46□□□□□ -0.74
VPS8-204ENST00000424463 NRDCO43847 1150 aa10.45□□□□□ -0.74
VPS8-204ENST00000424463 TERF1P54274 439 aa10.45□□□□□ -0.74
VPS8-204ENST00000424463 PDE4AP27815 886 aa10.45□□□□□ -0.74
VPS8-204ENST00000424463 SSFA2P28290 1259 aa10.45□□□□□ -0.74
VPS8-204ENST00000424463 MTHFSDQ2M296 383 aaKnown RBP10.45□□□□□ -0.74
VPS8-204ENST00000424463 CAPN2P17655 700 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
VPS8-204ENST00000424463 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 TESPA1A2RU30 521 aaPredicted RBP10.44□□□□□ -0.74
VPS8-204ENST00000424463 GOLGA6CA6NDK9 693 aa10.44□□□□□ -0.74
VPS8-204ENST00000424463 GOLGA6BA6NDN3 693 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms