RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CCER2I3L3R5 266 aa33.47■■■□□ 2.95
TSPAN3-203ENST00000424443 FAM9BQ8IZU0 186 aa33.47■■■□□ 2.95
TSPAN3-203ENST00000424443 ASAP1Q9ULH1 1129 aa33.47■■■□□ 2.95
TSPAN3-203ENST00000424443 NEUROD2Q15784 382 aa33.46■■■□□ 2.95
TSPAN3-203ENST00000424443 DLG5Q8TDM6 1919 aa33.46■■■□□ 2.95
TSPAN3-203ENST00000424443 LMOD3Q0VAK6 560 aa33.45■■■□□ 2.95
TSPAN3-203ENST00000424443 PROM2Q8N271 834 aa33.45■■■□□ 2.95
TSPAN3-203ENST00000424443 RREB1Q92766 1687 aa33.45■■■□□ 2.95
TSPAN3-203ENST00000424443 MRC1P22897 1456 aa33.45■■■□□ 2.94
TSPAN3-203ENST00000424443 DCTN1Q14203 1278 aa33.44■■■□□ 2.94
TSPAN3-203ENST00000424443 SLC27A3Q5K4L6 730 aa33.44■■■□□ 2.94
TSPAN3-203ENST00000424443 ATG3Q9NT62 314 aa33.44■■■□□ 2.94
TSPAN3-203ENST00000424443 RRP7AQ9Y3A4 280 aaKnown RBP33.44■■■□□ 2.94
TSPAN3-203ENST00000424443 CEMIPQ8WUJ3 1361 aa33.44■■■□□ 2.94
TSPAN3-203ENST00000424443 CCNL1Q9UK58 526 aaPredicted RBP33.43■■■□□ 2.94
TSPAN3-203ENST00000424443 NBPF14Q5TI25 921 aa33.42■■■□□ 2.94
TSPAN3-203ENST00000424443 LY75O60449 1722 aa33.41■■■□□ 2.94
TSPAN3-203ENST00000424443 APAF1O14727 1248 aa33.41■■■□□ 2.94
TSPAN3-203ENST00000424443 MIER1Q8N108 512 aa33.41■■■□□ 2.94
TSPAN3-203ENST00000424443 NUP188Q5SRE5 1749 aa33.39■■■□□ 2.94
TSPAN3-203ENST00000424443 HMGB2P26583 209 aaKnown RBP33.38■■■□□ 2.93
TSPAN3-203ENST00000424443 RBM42Q9BTD8 480 aaKnown RBP33.38■■■□□ 2.93
TSPAN3-203ENST00000424443 LOC102724428A0A0B4J2F2 783 aa33.37■■■□□ 2.93
TSPAN3-203ENST00000424443 SIK1P57059 783 aa33.37■■■□□ 2.93
TSPAN3-203ENST00000424443 TTC5Q8N0Z6 440 aa33.37■■■□□ 2.93
TSPAN3-203ENST00000424443 LRRC4BQ9NT99 713 aa33.37■■■□□ 2.93
TSPAN3-203ENST00000424443 BTBD11A6QL63 1104 aa33.36■■■□□ 2.93
TSPAN3-203ENST00000424443 KCNQ4P56696 695 aa33.36■■■□□ 2.93
TSPAN3-203ENST00000424443 SLC39A6Q13433 755 aa33.36■■■□□ 2.93
TSPAN3-203ENST00000424443 PTCD1O75127 700 aaKnown RBP33.35■■■□□ 2.93
TSPAN3-203ENST00000424443 ATP6V1AP38606 617 aa33.33■■■□□ 2.93
TSPAN3-203ENST00000424443 TAF7Q15545 349 aaPredicted RBP33.33■■■□□ 2.93
TSPAN3-203ENST00000424443 THUMPD2Q9BTF0 503 aaKnown RBP33.33■■■□□ 2.93
TSPAN3-203ENST00000424443 SIPA1L3O60292 1781 aaPredicted RBP33.33■■■□□ 2.93
TSPAN3-203ENST00000424443 STK32BQ9NY57 414 aa33.32■■■□□ 2.92
TSPAN3-203ENST00000424443 ZNF790Q6PG37 636 aa33.3■■■□□ 2.92
TSPAN3-203ENST00000424443 TRIM35Q9UPQ4 493 aa33.29■■■□□ 2.92
TSPAN3-203ENST00000424443 PAPPAQ13219 1627 aa33.29■■■□□ 2.92
TSPAN3-203ENST00000424443 ANO8Q9HCE9 1232 aaPredicted RBP33.26■■■□□ 2.91
TSPAN3-203ENST00000424443 C5P01031 1676 aa33.25■■■□□ 2.91
TSPAN3-203ENST00000424443 SENP3-EIF4A1A0A087X0R7 540 aa33.25■■■□□ 2.91
TSPAN3-203ENST00000424443 R3HDM1Q15032 1099 aaKnown RBP33.25■■■□□ 2.91
TSPAN3-203ENST00000424443 SLC15A2Q16348 729 aa33.24■■■□□ 2.91
TSPAN3-203ENST00000424443 FMNL2Q96PY5 1086 aa33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 SLC4A9Q96Q91 983 aa33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 MIS18AQ9NYP9 233 aa33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 PSDA5PKW4 1024 aaPredicted RBP33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 CALD1Q05682 793 aaKnown RBP33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 ITPK1Q13572 414 aa33.23■■■□□ 2.91
TSPAN3-203ENST00000424443 TAF1LQ8IZX4 1826 aa33.22■■■□□ 2.91
TSPAN3-203ENST00000424443 KCPQ6ZWJ8 1503 aa33.22■■■□□ 2.91
TSPAN3-203ENST00000424443 ZNF831Q5JPB2 1677 aa33.21■■■□□ 2.91
TSPAN3-203ENST00000424443 ZNF496Q96IT1 587 aaPredicted RBP33.21■■■□□ 2.91
TSPAN3-203ENST00000424443 TSPYL4Q9UJ04 414 aa33.21■■■□□ 2.91
TSPAN3-203ENST00000424443 LAS1LQ9Y4W2 734 aaKnown RBP33.21■■■□□ 2.91
TSPAN3-203ENST00000424443 KCNQ3O43525 872 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 ZNF827Q17R98 1081 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 VSIG10Q8N0Z9 540 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 LINC00116Q8NCU8 138 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 AK7Q96M32 723 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 TFCP2L1Q9NZI6 479 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 UBR2Q8IWV8 1755 aa33.2■■■□□ 2.91
TSPAN3-203ENST00000424443 AKT1S1Q96B36 256 aa33.19■■■□□ 2.9
TSPAN3-203ENST00000424443 SALL2Q9Y467 1007 aaPredicted RBP33.19■■■□□ 2.9
TSPAN3-203ENST00000424443 CCDC27Q2M243 656 aa33.18■■■□□ 2.9
TSPAN3-203ENST00000424443 NCBP3Q53F19 620 aaKnown RBP33.18■■■□□ 2.9
TSPAN3-203ENST00000424443 BABAM1Q9NWV8 329 aa33.18■■■□□ 2.9
TSPAN3-203ENST00000424443 HEG1Q9ULI3 1381 aa33.17■■■□□ 2.9
TSPAN3-203ENST00000424443 C4BP0C0L5 1744 aa33.17■■■□□ 2.9
TSPAN3-203ENST00000424443 DNAJC10Q8IXB1 793 aa33.16■■■□□ 2.9
TSPAN3-203ENST00000424443 NGEFQ8N5V2 710 aa33.15■■■□□ 2.9
TSPAN3-203ENST00000424443 TEX13AQ9BXU3 409 aaPredicted RBP33.15■■■□□ 2.9
TSPAN3-203ENST00000424443 WWC1Q8IX03 1113 aa33.13■■■□□ 2.89
TSPAN3-203ENST00000424443 KDM3BQ7LBC6 1761 aa33.13■■■□□ 2.89
TSPAN3-203ENST00000424443 TJP1Q07157 1748 aa33.13■■■□□ 2.89
TSPAN3-203ENST00000424443 STARD3NLO95772 234 aa33.12■■■□□ 2.89
TSPAN3-203ENST00000424443 CFAP44Q96MT7 982 aa33.12■■■□□ 2.89
TSPAN3-203ENST00000424443 CICQ96RK0 1608 aaPredicted RBP33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 COL5A3P25940 1745 aaPredicted RBP33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 GNPATO15228 680 aa33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 SNRPA1P09661 255 aaKnown RBP33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 RC3H1Q5TC82 1133 aaKnown RBP33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 CNTNAP4Q9C0A0 1308 aa33.11■■■□□ 2.89
TSPAN3-203ENST00000424443 CHL1O00533 1208 aa33.1■■■□□ 2.89
TSPAN3-203ENST00000424443 GNAI1P63096 354 aa33.1■■■□□ 2.89
TSPAN3-203ENST00000424443 CRKLP46109 303 aaKnown RBP33.09■■■□□ 2.89
TSPAN3-203ENST00000424443 EIF4A1P60842 406 aaKnown RBP33.09■■■□□ 2.89
TSPAN3-203ENST00000424443 IFT57Q9NWB7 429 aa33.09■■■□□ 2.89
TSPAN3-203ENST00000424443 FLAD1Q8NFF5 587 aa33.08■■■□□ 2.89
TSPAN3-203ENST00000424443 MSH5O43196 834 aa33.07■■■□□ 2.89
TSPAN3-203ENST00000424443 CYP19A1P11511 503 aaPredicted RBP33.07■■■□□ 2.89
TSPAN3-203ENST00000424443 RTCBQ9Y3I0 505 aaKnown RBP33.07■■■□□ 2.89
TSPAN3-203ENST00000424443 PHF14O94880 888 aa33.07■■■□□ 2.88
TSPAN3-203ENST00000424443 CCDC87Q9NVE4 849 aa33.06■■■□□ 2.88
TSPAN3-203ENST00000424443 PNPLA7Q6ZV29 1317 aa33.05■■■□□ 2.88
TSPAN3-203ENST00000424443 QSER1Q2KHR3 1735 aa33.04■■■□□ 2.88
TSPAN3-203ENST00000424443 SSFA2P28290 1259 aa33.04■■■□□ 2.88
TSPAN3-203ENST00000424443 WDR63Q8IWG1 891 aa33.04■■■□□ 2.88
TSPAN3-203ENST00000424443 TUBGCP6Q96RT7 1819 aa33.04■■■□□ 2.88
TSPAN3-203ENST00000424443 RPS6KA4O75676 772 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms