RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
ACTN4-203ENST00000424234 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
ACTN4-203ENST00000424234 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
ACTN4-203ENST00000424234 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
ACTN4-203ENST00000424234 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
ACTN4-203ENST00000424234 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
ACTN4-203ENST00000424234 IL17REQ8NFR9 667 aa18.27■□□□□ 0.52
ACTN4-203ENST00000424234 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
ACTN4-203ENST00000424234 C5P01031 1676 aa18.27■□□□□ 0.52
ACTN4-203ENST00000424234 LY75O60449 1722 aa18.27■□□□□ 0.51
ACTN4-203ENST00000424234 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
ACTN4-203ENST00000424234 CDCA7LQ96GN5 454 aa18.26■□□□□ 0.51
ACTN4-203ENST00000424234 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
ACTN4-203ENST00000424234 KRT27Q7Z3Y8 459 aa18.25■□□□□ 0.51
ACTN4-203ENST00000424234 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
ACTN4-203ENST00000424234 RGPD3A6NKT7 1758 aaPredicted RBP18.24■□□□□ 0.51
ACTN4-203ENST00000424234 RGPD4Q7Z3J3 1758 aa18.24■□□□□ 0.51
ACTN4-203ENST00000424234 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
ACTN4-203ENST00000424234 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
ACTN4-203ENST00000424234 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
ACTN4-203ENST00000424234 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
ACTN4-203ENST00000424234 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 TJP1Q07157 1748 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 TEFQ10587 303 aa18.21■□□□□ 0.51
ACTN4-203ENST00000424234 IL16Q14005 1332 aa18.2■□□□□ 0.5
ACTN4-203ENST00000424234 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
ACTN4-203ENST00000424234 KCPQ6ZWJ8 1503 aa18.2■□□□□ 0.5
ACTN4-203ENST00000424234 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
ACTN4-203ENST00000424234 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
ACTN4-203ENST00000424234 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
ACTN4-203ENST00000424234 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
ACTN4-203ENST00000424234 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 CABP4P57796 275 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 EXOC6Q8TAG9 804 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 TMOD3Q9NYL9 352 aa18.17■□□□□ 0.5
ACTN4-203ENST00000424234 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
ACTN4-203ENST00000424234 GNAI1P63096 354 aa18.16■□□□□ 0.5
ACTN4-203ENST00000424234 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
ACTN4-203ENST00000424234 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
ACTN4-203ENST00000424234 KCNQ2O43526 872 aa18.15■□□□□ 0.5
ACTN4-203ENST00000424234 PIGBQ92521 554 aa18.15■□□□□ 0.5
ACTN4-203ENST00000424234 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
ACTN4-203ENST00000424234 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
ACTN4-203ENST00000424234 BTBD11A6QL63 1104 aa18.14■□□□□ 0.49
ACTN4-203ENST00000424234 E9PSI1 815 aa18.14■□□□□ 0.49
ACTN4-203ENST00000424234 CHL1O00533 1208 aa18.14■□□□□ 0.49
ACTN4-203ENST00000424234 SLFN5Q08AF3 891 aa18.14■□□□□ 0.49
ACTN4-203ENST00000424234 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
ACTN4-203ENST00000424234 TSPYL4Q9UJ04 414 aa18.14■□□□□ 0.49
ACTN4-203ENST00000424234 RREB1Q92766 1687 aa18.13■□□□□ 0.49
ACTN4-203ENST00000424234 MYH14Q7Z406 1995 aaKnown RBP18.13■□□□□ 0.49
ACTN4-203ENST00000424234 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
ACTN4-203ENST00000424234 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
ACTN4-203ENST00000424234 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
ACTN4-203ENST00000424234 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
ACTN4-203ENST00000424234 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
ACTN4-203ENST00000424234 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
ACTN4-203ENST00000424234 KCNQ3O43525 872 aa18.11■□□□□ 0.49
ACTN4-203ENST00000424234 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
ACTN4-203ENST00000424234 ZNF790Q6PG37 636 aa18.1■□□□□ 0.49
ACTN4-203ENST00000424234 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
ACTN4-203ENST00000424234 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
ACTN4-203ENST00000424234 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
ACTN4-203ENST00000424234 TRIM37O94972 964 aa18.09■□□□□ 0.49
ACTN4-203ENST00000424234 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
ACTN4-203ENST00000424234 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
ACTN4-203ENST00000424234 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
ACTN4-203ENST00000424234 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.49
ACTN4-203ENST00000424234 HEG1Q9ULI3 1381 aa18.08■□□□□ 0.49
ACTN4-203ENST00000424234 PLIN1O60240 522 aa18.08■□□□□ 0.48
ACTN4-203ENST00000424234 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.48
ACTN4-203ENST00000424234 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
ACTN4-203ENST00000424234 EIF4A1P60842 406 aaKnown RBP18.07■□□□□ 0.48
ACTN4-203ENST00000424234 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
ACTN4-203ENST00000424234 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
ACTN4-203ENST00000424234 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
ACTN4-203ENST00000424234 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
ACTN4-203ENST00000424234 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
ACTN4-203ENST00000424234 TCERG1O14776 1098 aaKnown RBP18.04■□□□□ 0.48
ACTN4-203ENST00000424234 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
ACTN4-203ENST00000424234 FMNL2Q96PY5 1086 aa18.04■□□□□ 0.48
ACTN4-203ENST00000424234 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
ACTN4-203ENST00000424234 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
ACTN4-203ENST00000424234 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
ACTN4-203ENST00000424234 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
ACTN4-203ENST00000424234 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
ACTN4-203ENST00000424234 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
ACTN4-203ENST00000424234 QSER1Q2KHR3 1735 aa18.02■□□□□ 0.47
ACTN4-203ENST00000424234 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
ACTN4-203ENST00000424234 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 PRAMEF22A3QJZ6 481 aa18■□□□□ 0.47
ACTN4-203ENST00000424234 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms