RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 PRAG1Q86YV5 1406 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 PLEKHG1Q9ULL1 1385 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 DNAJC2Q99543 621 aaKnown RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 APBA3O96018 575 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 MCM10Q7L590 875 aa10.09□□□□□ -0.79
CHD7-201ENST00000423902 NKTRP30414 1462 aaKnown RBP10.09□□□□□ -0.79
CHD7-201ENST00000423902 ZFYVE9O95405 1425 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHD7-201ENST00000423902 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
CHD7-201ENST00000423902 NOB1Q9ULX3 412 aaKnown RBP10.08□□□□□ -0.8
CHD7-201ENST00000423902 CROCC2H7BZ55 1655 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 SLC4A3P48751 1232 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 CCNL1Q9UK58 526 aaPredicted RBP10.08□□□□□ -0.8
CHD7-201ENST00000423902 EXOSC9Q06265 439 aaKnown RBP10.08□□□□□ -0.8
CHD7-201ENST00000423902 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 MYD88Q99836 296 aa10.08□□□□□ -0.8
CHD7-201ENST00000423902 USP5P45974 858 aa10.07□□□□□ -0.8
CHD7-201ENST00000423902 TMEM132AQ24JP5 1023 aa10.07□□□□□ -0.8
CHD7-201ENST00000423902 IP6K1Q92551 441 aa10.07□□□□□ -0.8
CHD7-201ENST00000423902 MPHOSPH6Q99547 160 aaKnown RBP10.07□□□□□ -0.8
CHD7-201ENST00000423902 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
CHD7-201ENST00000423902 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
CHD7-201ENST00000423902 SIL1Q9H173 461 aa10.07□□□□□ -0.8
CHD7-201ENST00000423902 TDO2P48775 406 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 TMEM94Q12767 1356 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 LRRCC1Q9C099 1032 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 BAG3O95817 575 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 NOL8Q76FK4 1167 aaKnown RBP10.06□□□□□ -0.8
CHD7-201ENST00000423902 CTNNA3Q9UI47 895 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 GPTP24298 496 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
CHD7-201ENST00000423902 FAM196AQ6ZSG2 479 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 SPRYD3Q8NCJ5 442 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 SIRT1Q96EB6 747 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 ABCF2Q9UG63 623 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 CAMSAP1Q5T5Y3 1602 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 ERVK-7P63135 1459 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 DNTTIP2Q5QJE6 756 aaKnown RBP10.05□□□□□ -0.8
CHD7-201ENST00000423902 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 EDC4Q6P2E9 1401 aaKnown RBP10.05□□□□□ -0.8
CHD7-201ENST00000423902 CRBNQ96SW2 442 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 EYA3Q99504 573 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 RRP12Q5JTH9 1297 aaKnown RBP10.05□□□□□ -0.8
CHD7-201ENST00000423902 LDHCP07864 332 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
CHD7-201ENST00000423902 GCC1Q96CN9 775 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
CHD7-201ENST00000423902 GSTO1P78417 241 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 PIK3R4Q99570 1358 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
CHD7-201ENST00000423902 TSR2Q969E8 191 aaKnown RBP10.04□□□□□ -0.8
CHD7-201ENST00000423902 A2ML1A8K2U0 1454 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 PTPRCP08575 1304 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 GNPATO15228 680 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 CCDC85AQ96PX6 553 aaPredicted RBP10.04□□□□□ -0.8
CHD7-201ENST00000423902 MAP3K12Q12852 859 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 PZPP20742 1482 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 AACSQ86V21 672 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 NIP7Q9Y221 180 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHD7-201ENST00000423902 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
CHD7-201ENST00000423902 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
CHD7-201ENST00000423902 RBM17Q96I25 401 aaKnown RBP10.03□□□□□ -0.8
CHD7-201ENST00000423902 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 ORAI2Q96SN7 254 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 ZRANB1Q9UGI0 708 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 GPR162Q16538 588 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 H0YIN7 160 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 HLA-DOAP06340 250 aa10.03□□□□□ -0.8
CHD7-201ENST00000423902 FEZ1Q99689 392 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 MAP3K4Q9Y6R4 1608 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 TNIP1Q15025 636 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 PDE3AQ14432 1141 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 SOGA3Q5TF21 947 aa10.02□□□□□ -0.8
CHD7-201ENST00000423902 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 UBAC1Q9BSL1 405 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 SYNMO15061 1565 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 TRIM22Q8IYM9 498 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 MKNK2Q9HBH9 465 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 ABCC3O15438 1527 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
CHD7-201ENST00000423902 TXLNAP40222 546 aa10.01□□□□□ -0.81
CHD7-201ENST00000423902 ZBTB3Q9H5J0 574 aa10.01□□□□□ -0.81
CHD7-201ENST00000423902 TPM1P09493 284 aa10.01□□□□□ -0.81
CHD7-201ENST00000423902 ZNF804AQ7Z570 1209 aa10.01□□□□□ -0.81
CHD7-201ENST00000423902 GLI2P10070 1586 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms