RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 LRRC4BQ9NT99 713 aa18.42■□□□□ 0.54
SEC23B-205ENST00000422877 TJP1Q07157 1748 aa18.41■□□□□ 0.54
SEC23B-205ENST00000422877 RNMTO43148 476 aaKnown RBP18.41■□□□□ 0.54
SEC23B-205ENST00000422877 ANP32CO43423 234 aa18.4■□□□□ 0.54
SEC23B-205ENST00000422877 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
SEC23B-205ENST00000422877 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
SEC23B-205ENST00000422877 ANO8Q9HCE9 1232 aaPredicted RBP18.4■□□□□ 0.54
SEC23B-205ENST00000422877 CCNL1Q9UK58 526 aaPredicted RBP18.4■□□□□ 0.54
SEC23B-205ENST00000422877 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
SEC23B-205ENST00000422877 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
SEC23B-205ENST00000422877 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
SEC23B-205ENST00000422877 SLC15A2Q16348 729 aa18.39■□□□□ 0.53
SEC23B-205ENST00000422877 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
SEC23B-205ENST00000422877 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
SEC23B-205ENST00000422877 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
SEC23B-205ENST00000422877 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
SEC23B-205ENST00000422877 HTATSF1O43719 755 aaKnown RBP18.38■□□□□ 0.53
SEC23B-205ENST00000422877 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
SEC23B-205ENST00000422877 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
SEC23B-205ENST00000422877 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
SEC23B-205ENST00000422877 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
SEC23B-205ENST00000422877 SIK1P57059 783 aa18.37■□□□□ 0.53
SEC23B-205ENST00000422877 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
SEC23B-205ENST00000422877 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
SEC23B-205ENST00000422877 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
SEC23B-205ENST00000422877 KCPQ6ZWJ8 1503 aa18.36■□□□□ 0.53
SEC23B-205ENST00000422877 AKT1S1Q96B36 256 aa18.36■□□□□ 0.53
SEC23B-205ENST00000422877 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
SEC23B-205ENST00000422877 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
SEC23B-205ENST00000422877 TEFQ10587 303 aa18.34■□□□□ 0.53
SEC23B-205ENST00000422877 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
SEC23B-205ENST00000422877 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
SEC23B-205ENST00000422877 ZNF827Q17R98 1081 aa18.33■□□□□ 0.52
SEC23B-205ENST00000422877 KCNQ4P56696 695 aa18.32■□□□□ 0.52
SEC23B-205ENST00000422877 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
SEC23B-205ENST00000422877 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
SEC23B-205ENST00000422877 LAMB4A4D0S4 1761 aa18.31■□□□□ 0.52
SEC23B-205ENST00000422877 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
SEC23B-205ENST00000422877 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
SEC23B-205ENST00000422877 ITPK1Q13572 414 aa18.29■□□□□ 0.52
SEC23B-205ENST00000422877 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
SEC23B-205ENST00000422877 RBM42Q9BTD8 480 aaKnown RBP18.29■□□□□ 0.52
SEC23B-205ENST00000422877 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
SEC23B-205ENST00000422877 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
SEC23B-205ENST00000422877 VSIG10Q8N0Z9 540 aa18.28■□□□□ 0.52
SEC23B-205ENST00000422877 LINC00116Q8NCU8 138 aa18.28■□□□□ 0.52
SEC23B-205ENST00000422877 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
SEC23B-205ENST00000422877 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.52
SEC23B-205ENST00000422877 TMPOP42166 694 aaKnown RBP18.27■□□□□ 0.52
SEC23B-205ENST00000422877 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 MCM10Q7L590 875 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
SEC23B-205ENST00000422877 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
SEC23B-205ENST00000422877 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
SEC23B-205ENST00000422877 AK7Q96M32 723 aa18.26■□□□□ 0.51
SEC23B-205ENST00000422877 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
SEC23B-205ENST00000422877 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
SEC23B-205ENST00000422877 SLC39A6Q13433 755 aa18.25■□□□□ 0.51
SEC23B-205ENST00000422877 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
SEC23B-205ENST00000422877 SSFA2P28290 1259 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 RIPK4P57078 832 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 CCDC146Q8IYE0 955 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 PDGFDQ9GZP0 370 aaPredicted RBP18.24■□□□□ 0.51
SEC23B-205ENST00000422877 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 SPON1Q9HCB6 807 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
SEC23B-205ENST00000422877 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
SEC23B-205ENST00000422877 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
SEC23B-205ENST00000422877 ADRA2BP18089 450 aa18.21■□□□□ 0.51
SEC23B-205ENST00000422877 ZNF496Q96IT1 587 aaPredicted RBP18.21■□□□□ 0.51
SEC23B-205ENST00000422877 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
SEC23B-205ENST00000422877 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
SEC23B-205ENST00000422877 GNPATO15228 680 aa18.2■□□□□ 0.5
SEC23B-205ENST00000422877 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
SEC23B-205ENST00000422877 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
SEC23B-205ENST00000422877 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
SEC23B-205ENST00000422877 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
SEC23B-205ENST00000422877 DNAJC10Q8IXB1 793 aa18.19■□□□□ 0.5
SEC23B-205ENST00000422877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.18■□□□□ 0.5
SEC23B-205ENST00000422877 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
SEC23B-205ENST00000422877 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
SEC23B-205ENST00000422877 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
SEC23B-205ENST00000422877 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
SEC23B-205ENST00000422877 RRP7AQ9Y3A4 280 aaKnown RBP18.18■□□□□ 0.5
SEC23B-205ENST00000422877 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 APAF1O14727 1248 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 STARD3NLO95772 234 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 SGIP1Q9BQI5 828 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
SEC23B-205ENST00000422877 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
SEC23B-205ENST00000422877 KCNQ3O43525 872 aa18.16■□□□□ 0.5
SEC23B-205ENST00000422877 PTGER2P43116 358 aa18.16■□□□□ 0.5
SEC23B-205ENST00000422877 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
SEC23B-205ENST00000422877 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms