RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 RNMTO43148 476 aaKnown RBP12.25□□□□□ -0.45
PDGFC-202ENST00000422544 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
PDGFC-202ENST00000422544 CABP4P57796 275 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 PIGBQ92521 554 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
PDGFC-202ENST00000422544 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 SHANK3Q9BYB0 1731 aa12.25□□□□□ -0.45
PDGFC-202ENST00000422544 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 APAF1O14727 1248 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 KDM6AO15550 1401 aaPredicted RBP12.24□□□□□ -0.45
PDGFC-202ENST00000422544 RIPK4P57078 832 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 DCTN1Q14203 1278 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 PROM2Q8N271 834 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
PDGFC-202ENST00000422544 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
PDGFC-202ENST00000422544 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
PDGFC-202ENST00000422544 PTGER2P43116 358 aa12.23□□□□□ -0.45
PDGFC-202ENST00000422544 MCM10Q7L590 875 aa12.23□□□□□ -0.45
PDGFC-202ENST00000422544 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
PDGFC-202ENST00000422544 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
PDGFC-202ENST00000422544 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
PDGFC-202ENST00000422544 PLSCR1O15162 318 aa12.21□□□□□ -0.45
PDGFC-202ENST00000422544 THUMPD2Q9BTF0 503 aaKnown RBP12.21□□□□□ -0.45
PDGFC-202ENST00000422544 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
PDGFC-202ENST00000422544 KAT6BQ8WYB5 2073 aa12.21□□□□□ -0.45
PDGFC-202ENST00000422544 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
PDGFC-202ENST00000422544 TEFQ10587 303 aa12.2□□□□□ -0.46
PDGFC-202ENST00000422544 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
PDGFC-202ENST00000422544 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
PDGFC-202ENST00000422544 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
PDGFC-202ENST00000422544 TUBGCP6Q96RT7 1819 aa12.19□□□□□ -0.46
PDGFC-202ENST00000422544 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
PDGFC-202ENST00000422544 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
PDGFC-202ENST00000422544 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
PDGFC-202ENST00000422544 KCNQ4P56696 695 aa12.18□□□□□ -0.46
PDGFC-202ENST00000422544 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
PDGFC-202ENST00000422544 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
PDGFC-202ENST00000422544 SMARCC1Q92922 1105 aaPredicted RBP12.18□□□□□ -0.46
PDGFC-202ENST00000422544 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
PDGFC-202ENST00000422544 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
PDGFC-202ENST00000422544 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
PDGFC-202ENST00000422544 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
PDGFC-202ENST00000422544 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
PDGFC-202ENST00000422544 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
PDGFC-202ENST00000422544 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
PDGFC-202ENST00000422544 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
PDGFC-202ENST00000422544 PTCD1O75127 700 aaKnown RBP12.16□□□□□ -0.46
PDGFC-202ENST00000422544 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
PDGFC-202ENST00000422544 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
PDGFC-202ENST00000422544 KCNQ3O43525 872 aa12.15□□□□□ -0.46
PDGFC-202ENST00000422544 SIK1P57059 783 aa12.15□□□□□ -0.46
PDGFC-202ENST00000422544 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
PDGFC-202ENST00000422544 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
PDGFC-202ENST00000422544 ZBTB7AO95365 584 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 SLC4A9Q96Q91 983 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
PDGFC-202ENST00000422544 MRC1P22897 1456 aa12.14□□□□□ -0.47
PDGFC-202ENST00000422544 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 CCDC27Q2M243 656 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 BTAF1O14981 1849 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
PDGFC-202ENST00000422544 ITGB4P16144 1822 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 ITPK1Q13572 414 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
PDGFC-202ENST00000422544 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
PDGFC-202ENST00000422544 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
PDGFC-202ENST00000422544 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
PDGFC-202ENST00000422544 CHL1O00533 1208 aa12.11□□□□□ -0.47
PDGFC-202ENST00000422544 CALD1Q05682 793 aaKnown RBP12.11□□□□□ -0.47
PDGFC-202ENST00000422544 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
PDGFC-202ENST00000422544 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
PDGFC-202ENST00000422544 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
PDGFC-202ENST00000422544 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
PDGFC-202ENST00000422544 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
PDGFC-202ENST00000422544 BABAM1Q9NWV8 329 aa12.1□□□□□ -0.47
PDGFC-202ENST00000422544 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 EIF4A1P60842 406 aaKnown RBP12.09□□□□□ -0.47
PDGFC-202ENST00000422544 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
PDGFC-202ENST00000422544 PCNTO95613 3336 aa12.08□□□□□ -0.48
PDGFC-202ENST00000422544 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
PDGFC-202ENST00000422544 GNAI1P63096 354 aa12.08□□□□□ -0.48
PDGFC-202ENST00000422544 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms