RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
CAST-208ENST00000421689 TAF7Q15545 349 aaPredicted RBP15.43■□□□□ 0.06
CAST-208ENST00000421689 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
CAST-208ENST00000421689 TRIM37O94972 964 aa15.42■□□□□ 0.06
CAST-208ENST00000421689 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
CAST-208ENST00000421689 BTAF1O14981 1849 aa15.41■□□□□ 0.06
CAST-208ENST00000421689 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
CAST-208ENST00000421689 PIGBQ92521 554 aa15.41■□□□□ 0.06
CAST-208ENST00000421689 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
CAST-208ENST00000421689 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
CAST-208ENST00000421689 ZNF521Q96K83 1311 aa15.4■□□□□ 0.06
CAST-208ENST00000421689 GNAI1P63096 354 aa15.39■□□□□ 0.05
CAST-208ENST00000421689 PTF1AQ7RTS3 328 aa15.39■□□□□ 0.05
CAST-208ENST00000421689 CFAP44Q96MT7 982 aa15.39■□□□□ 0.05
CAST-208ENST00000421689 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
CAST-208ENST00000421689 IL16Q14005 1332 aa15.39■□□□□ 0.05
CAST-208ENST00000421689 EP400Q96L91 3159 aa15.38■□□□□ 0.05
CAST-208ENST00000421689 CCDC125Q86Z20 511 aa15.38■□□□□ 0.05
CAST-208ENST00000421689 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
CAST-208ENST00000421689 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
CAST-208ENST00000421689 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
CAST-208ENST00000421689 KDM3BQ7LBC6 1761 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 CHL1O00533 1208 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 ZNF853P0CG23 659 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
CAST-208ENST00000421689 ATG3Q9NT62 314 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 TSPYL4Q9UJ04 414 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
CAST-208ENST00000421689 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
CAST-208ENST00000421689 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
CAST-208ENST00000421689 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
CAST-208ENST00000421689 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
CAST-208ENST00000421689 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
CAST-208ENST00000421689 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
CAST-208ENST00000421689 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
CAST-208ENST00000421689 PLSCR1O15162 318 aa15.35■□□□□ 0.05
CAST-208ENST00000421689 APBA3O96018 575 aa15.35■□□□□ 0.05
CAST-208ENST00000421689 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
CAST-208ENST00000421689 LY75O60449 1722 aa15.34■□□□□ 0.05
CAST-208ENST00000421689 MBIPQ9NS73 344 aa15.34■□□□□ 0.05
CAST-208ENST00000421689 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
CAST-208ENST00000421689 E9PSI1 815 aa15.33■□□□□ 0.04
CAST-208ENST00000421689 KCNQ3O43525 872 aa15.33■□□□□ 0.04
CAST-208ENST00000421689 BAG6P46379 1132 aa15.33■□□□□ 0.04
CAST-208ENST00000421689 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
CAST-208ENST00000421689 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
CAST-208ENST00000421689 RGPD3A6NKT7 1758 aaPredicted RBP15.33■□□□□ 0.04
CAST-208ENST00000421689 RGPD4Q7Z3J3 1758 aa15.33■□□□□ 0.04
CAST-208ENST00000421689 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
CAST-208ENST00000421689 FMNL2Q96PY5 1086 aa15.32■□□□□ 0.04
CAST-208ENST00000421689 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
CAST-208ENST00000421689 SPINK5Q9NQ38 1064 aaPredicted RBP15.32■□□□□ 0.04
CAST-208ENST00000421689 KCPQ6ZWJ8 1503 aa15.32■□□□□ 0.04
CAST-208ENST00000421689 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
CAST-208ENST00000421689 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
CAST-208ENST00000421689 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
CAST-208ENST00000421689 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
CAST-208ENST00000421689 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
CAST-208ENST00000421689 ZNF831Q5JPB2 1677 aa15.31■□□□□ 0.04
CAST-208ENST00000421689 LOC102724428A0A0B4J2F2 783 aa15.3■□□□□ 0.04
CAST-208ENST00000421689 SIK1P57059 783 aa15.3■□□□□ 0.04
CAST-208ENST00000421689 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
CAST-208ENST00000421689 VSIG10Q8N0Z9 540 aa15.3■□□□□ 0.04
CAST-208ENST00000421689 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
CAST-208ENST00000421689 HEG1Q9ULI3 1381 aa15.29■□□□□ 0.04
CAST-208ENST00000421689 TRMT2AQ8IZ69 625 aaKnown RBP15.29■□□□□ 0.04
CAST-208ENST00000421689 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
CAST-208ENST00000421689 HMGB2P26583 209 aaKnown RBP15.28■□□□□ 0.04
CAST-208ENST00000421689 ATP6V1AP38606 617 aa15.28■□□□□ 0.04
CAST-208ENST00000421689 EN1Q05925 392 aaPredicted RBP15.28■□□□□ 0.04
CAST-208ENST00000421689 TXNRD1Q16881 649 aa15.28■□□□□ 0.04
CAST-208ENST00000421689 SLC27A3Q5K4L6 730 aa15.28■□□□□ 0.04
CAST-208ENST00000421689 CAMKK2Q96RR4 588 aa15.28■□□□□ 0.04
CAST-208ENST00000421689 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
CAST-208ENST00000421689 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
CAST-208ENST00000421689 TJP1Q07157 1748 aa15.27■□□□□ 0.04
CAST-208ENST00000421689 DEFB132Q7Z7B7 95 aa15.27■□□□□ 0.04
CAST-208ENST00000421689 PROM2Q8N271 834 aa15.27■□□□□ 0.04
CAST-208ENST00000421689 SLC4A9Q96Q91 983 aa15.27■□□□□ 0.04
CAST-208ENST00000421689 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
CAST-208ENST00000421689 TAF1LQ8IZX4 1826 aa15.27■□□□□ 0.03
CAST-208ENST00000421689 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
CAST-208ENST00000421689 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
CAST-208ENST00000421689 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
CAST-208ENST00000421689 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
CAST-208ENST00000421689 C5P01031 1676 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 SOS1Q07889 1333 aaPredicted RBP15.25■□□□□ 0.03
CAST-208ENST00000421689 HOXB7P09629 217 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 KRT24Q2M2I5 525 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 C8orf58Q8NAV2 365 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 LAMB4A4D0S4 1761 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
CAST-208ENST00000421689 RREB1Q92766 1687 aa15.25■□□□□ 0.03
CAST-208ENST00000421689 KCNQ4P56696 695 aa15.24■□□□□ 0.03
CAST-208ENST00000421689 ITPK1Q13572 414 aa15.24■□□□□ 0.03
CAST-208ENST00000421689 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
CAST-208ENST00000421689 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
CAST-208ENST00000421689 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
CAST-208ENST00000421689 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms