RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
LEMD2-202ENST00000421671 FAM208AQ9UK61 1670 aaKnown RBP26.72■■□□□ 1.87
LEMD2-202ENST00000421671 PTMSP20962 102 aa26.72■■□□□ 1.87
LEMD2-202ENST00000421671 RPAP2Q8IXW5 612 aaPredicted RBP26.72■■□□□ 1.87
LEMD2-202ENST00000421671 PROSER2Q86WR7 435 aaPredicted RBP26.71■■□□□ 1.87
LEMD2-202ENST00000421671 F6X3S4 739 aa26.71■■□□□ 1.87
LEMD2-202ENST00000421671 IP6K1Q92551 441 aa26.71■■□□□ 1.87
LEMD2-202ENST00000421671 RBM25P49756 843 aaKnown RBP26.7■■□□□ 1.86
LEMD2-202ENST00000421671 CIZ1Q9ULV3 898 aaPredicted RBP26.7■■□□□ 1.86
LEMD2-202ENST00000421671 PLEKHM2Q8IWE5 1019 aa26.69■■□□□ 1.86
LEMD2-202ENST00000421671 GBP4Q96PP9 640 aa26.68■■□□□ 1.86
LEMD2-202ENST00000421671 PSME1Q06323 249 aa26.68■■□□□ 1.86
LEMD2-202ENST00000421671 SNX21Q969T3 373 aa26.68■■□□□ 1.86
LEMD2-202ENST00000421671 RGPD2P0DJD1 1756 aa26.68■■□□□ 1.86
LEMD2-202ENST00000421671 TBC1D9Q6ZT07 1266 aa26.67■■□□□ 1.86
LEMD2-202ENST00000421671 GAS2L3Q86XJ1 694 aa26.67■■□□□ 1.86
LEMD2-202ENST00000421671 GSPT1P15170 499 aaKnown RBP26.67■■□□□ 1.86
LEMD2-202ENST00000421671 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
LEMD2-202ENST00000421671 C16orf71Q8IYS4 520 aaPredicted RBP26.66■■□□□ 1.86
LEMD2-202ENST00000421671 NBPF6Q5VWK0 638 aa26.66■■□□□ 1.86
LEMD2-202ENST00000421671 SLC4A10Q6U841 1118 aa26.66■■□□□ 1.86
LEMD2-202ENST00000421671 NBPF4Q96M43 638 aa26.66■■□□□ 1.86
LEMD2-202ENST00000421671 PHRF1Q9P1Y6 1649 aaKnown RBP26.66■■□□□ 1.86
LEMD2-202ENST00000421671 CACNA1FO60840 1977 aa26.65■■□□□ 1.86
LEMD2-202ENST00000421671 TNPO1Q92973 898 aaKnown RBP26.65■■□□□ 1.86
LEMD2-202ENST00000421671 CCDC173Q0VFZ6 552 aa26.65■■□□□ 1.86
LEMD2-202ENST00000421671 TAF7Q15545 349 aaPredicted RBP26.65■■□□□ 1.86
LEMD2-202ENST00000421671 CCT4P50991 539 aaKnown RBP26.64■■□□□ 1.86
LEMD2-202ENST00000421671 STK31Q9BXU1 1019 aa26.64■■□□□ 1.86
LEMD2-202ENST00000421671 KIAA1211Q6ZU35 1233 aa26.64■■□□□ 1.85
LEMD2-202ENST00000421671 TERF1P54274 439 aa26.63■■□□□ 1.85
LEMD2-202ENST00000421671 CCDC30Q5VVM6 783 aa26.63■■□□□ 1.85
LEMD2-202ENST00000421671 PPP1R9BQ96SB3 815 aa26.63■■□□□ 1.85
LEMD2-202ENST00000421671 BABAM1Q9NWV8 329 aa26.63■■□□□ 1.85
LEMD2-202ENST00000421671 FLIIQ13045 1269 aa26.62■■□□□ 1.85
LEMD2-202ENST00000421671 OTUD7AQ8TE49 926 aaPredicted RBP26.62■■□□□ 1.85
LEMD2-202ENST00000421671 NECTIN2Q92692 538 aa26.62■■□□□ 1.85
LEMD2-202ENST00000421671 CEMIPQ8WUJ3 1361 aa26.61■■□□□ 1.85
LEMD2-202ENST00000421671 RAB3GAP1Q15042 981 aa26.61■■□□□ 1.85
LEMD2-202ENST00000421671 KCNH5Q8NCM2 988 aa26.61■■□□□ 1.85
LEMD2-202ENST00000421671 KIF2CQ99661 725 aa26.61■■□□□ 1.85
LEMD2-202ENST00000421671 SMARCA5O60264 1052 aaPredicted RBP26.6■■□□□ 1.85
LEMD2-202ENST00000421671 TTC22Q5TAA0 569 aa26.6■■□□□ 1.85
LEMD2-202ENST00000421671 LMOD2Q6P5Q4 547 aa26.6■■□□□ 1.85
LEMD2-202ENST00000421671 ZSCAN30Q86W11 494 aa26.6■■□□□ 1.85
LEMD2-202ENST00000421671 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
LEMD2-202ENST00000421671 OFD1O75665 1012 aa26.6■■□□□ 1.85
LEMD2-202ENST00000421671 CDC45O75419 566 aa26.59■■□□□ 1.85
LEMD2-202ENST00000421671 SOS1Q07889 1333 aaPredicted RBP26.59■■□□□ 1.85
LEMD2-202ENST00000421671 N4BP2Q86UW6 1770 aaPredicted RBP26.59■■□□□ 1.85
LEMD2-202ENST00000421671 DDX17Q92841 729 aaKnown RBP26.58■■□□□ 1.85
LEMD2-202ENST00000421671 FKBP5Q13451 457 aaPredicted RBP26.57■■□□□ 1.84
LEMD2-202ENST00000421671 LRRC59Q96AG4 307 aaKnown RBP26.57■■□□□ 1.84
LEMD2-202ENST00000421671 SLIT3O75094 1523 aa26.57■■□□□ 1.84
LEMD2-202ENST00000421671 STRCP1A6NGW2 1772 aa26.57■■□□□ 1.84
LEMD2-202ENST00000421671 APBB1O00213 710 aa26.56■■□□□ 1.84
LEMD2-202ENST00000421671 ANP32BQ92688 251 aaKnown RBP26.56■■□□□ 1.84
LEMD2-202ENST00000421671 LGR6Q9HBX8 967 aa26.56■■□□□ 1.84
LEMD2-202ENST00000421671 KDM3BQ7LBC6 1761 aa26.55■■□□□ 1.84
LEMD2-202ENST00000421671 TRPM3Q9HCF6 1732 aaPredicted RBP26.55■■□□□ 1.84
LEMD2-202ENST00000421671 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.55■■□□□ 1.84
LEMD2-202ENST00000421671 LMO7Q8WWI1 1683 aa26.55■■□□□ 1.84
LEMD2-202ENST00000421671 TMEM94Q12767 1356 aa26.55■■□□□ 1.84
LEMD2-202ENST00000421671 GCP02774 474 aa26.55■■□□□ 1.84
LEMD2-202ENST00000421671 GNAI2P04899 355 aa26.54■■□□□ 1.84
LEMD2-202ENST00000421671 ARHGEF25Q86VW2 580 aa26.54■■□□□ 1.84
LEMD2-202ENST00000421671 HMMRO75330 724 aa26.54■■□□□ 1.84
LEMD2-202ENST00000421671 HSP90AB1P08238 724 aaKnown RBP26.54■■□□□ 1.84
LEMD2-202ENST00000421671 IBTKQ9P2D0 1353 aaPredicted RBP26.53■■□□□ 1.84
LEMD2-202ENST00000421671 NASPP49321 788 aaPredicted RBP26.53■■□□□ 1.84
LEMD2-202ENST00000421671 MAP7D2Q96T17 732 aa26.53■■□□□ 1.84
LEMD2-202ENST00000421671 C1orf167Q5SNV9 1468 aa26.53■■□□□ 1.84
LEMD2-202ENST00000421671 C19orf44Q9H6X5 657 aa26.53■■□□□ 1.84
LEMD2-202ENST00000421671 NCAPD2Q15021 1401 aa26.52■■□□□ 1.84
LEMD2-202ENST00000421671 KDM4FA0A1W2PPD8 638 aa26.51■■□□□ 1.84
LEMD2-202ENST00000421671 MSNP26038 577 aaKnown RBP26.51■■□□□ 1.84
LEMD2-202ENST00000421671 HDGFL1Q5TGJ6 251 aa26.51■■□□□ 1.83
LEMD2-202ENST00000421671 KRT28Q7Z3Y7 464 aa26.5■■□□□ 1.83
LEMD2-202ENST00000421671 PXDNLA1KZ92 1463 aa26.5■■□□□ 1.83
LEMD2-202ENST00000421671 EIF4A1P60842 406 aaKnown RBP26.5■■□□□ 1.83
LEMD2-202ENST00000421671 PHAXQ9H814 394 aaKnown RBP26.5■■□□□ 1.83
LEMD2-202ENST00000421671 SDSP20132 328 aa26.49■■□□□ 1.83
LEMD2-202ENST00000421671 GOLGA6L22H0YM25 854 aa26.49■■□□□ 1.83
LEMD2-202ENST00000421671 GNAI3P08754 354 aa26.49■■□□□ 1.83
LEMD2-202ENST00000421671 HS1BP3Q53T59 392 aa26.49■■□□□ 1.83
LEMD2-202ENST00000421671 PXDNQ92626 1479 aa26.48■■□□□ 1.83
LEMD2-202ENST00000421671 KCNQ3O43525 872 aa26.48■■□□□ 1.83
LEMD2-202ENST00000421671 CD2BP2O95400 341 aaKnown RBP26.48■■□□□ 1.83
LEMD2-202ENST00000421671 CLEC17AQ6ZS10 378 aa26.48■■□□□ 1.83
LEMD2-202ENST00000421671 PNMA6EA0A0J9YXQ4 647 aa26.48■■□□□ 1.83
LEMD2-202ENST00000421671 AKAP4Q5JQC9 854 aa26.48■■□□□ 1.83
LEMD2-202ENST00000421671 ZNF530Q6P9A1 599 aaPredicted RBP26.48■■□□□ 1.83
LEMD2-202ENST00000421671 RBM42Q9BTD8 480 aaKnown RBP26.47■■□□□ 1.83
LEMD2-202ENST00000421671 EXOC6BQ9Y2D4 811 aa26.47■■□□□ 1.83
LEMD2-202ENST00000421671 ATP8B2P98198 1209 aa26.47■■□□□ 1.83
LEMD2-202ENST00000421671 CAMTA1Q9Y6Y1 1673 aa26.47■■□□□ 1.83
LEMD2-202ENST00000421671 USP44Q9H0E7 712 aa26.46■■□□□ 1.83
LEMD2-202ENST00000421671 KLHL40Q2TBA0 621 aa26.45■■□□□ 1.83
LEMD2-202ENST00000421671 PLEKHO1Q53GL0 409 aaPredicted RBP26.45■■□□□ 1.83
LEMD2-202ENST00000421671 ANKRD24Q8TF21 1146 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms