RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 TATDN2Q93075 761 aa10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 TRPC5Q9UL62 973 aaPredicted RBP10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 COL22A1Q8NFW1 1626 aaPredicted RBP10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 PPIP5K1Q6PFW1 1433 aa10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 POLR3AO14802 1390 aaPredicted RBP10.64□□□□□ -0.71
AC012560.1-202ENST00000421324 SMAPO00193 183 aa10.63□□□□□ -0.71
AC012560.1-202ENST00000421324 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
AC012560.1-202ENST00000421324 SMYD5Q6GMV2 418 aa10.63□□□□□ -0.71
AC012560.1-202ENST00000421324 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
AC012560.1-202ENST00000421324 ST20-MTHFSA0A0A6YYL1 179 aa10.62□□□□□ -0.71
AC012560.1-202ENST00000421324 PTPN5P54829 565 aa10.62□□□□□ -0.71
AC012560.1-202ENST00000421324 NUTM2GQ5VZR2 741 aa10.62□□□□□ -0.71
AC012560.1-202ENST00000421324 ANKK1Q8NFD2 765 aa10.62□□□□□ -0.71
AC012560.1-202ENST00000421324 QRICH2Q9H0J4 1663 aa10.62□□□□□ -0.71
AC012560.1-202ENST00000421324 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 FAM83GA6ND36 823 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 SOWAHBA6NEL2 793 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 NBPF26B4DH59 902 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 NLRP13Q86W25 1043 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 UNC5CLQ8IV45 518 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 ATAD2Q6PL18 1390 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
AC012560.1-202ENST00000421324 BCAMP50895 628 aa10.6□□□□□ -0.71
AC012560.1-202ENST00000421324 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
AC012560.1-202ENST00000421324 TMC1Q8TDI8 760 aa10.6□□□□□ -0.71
AC012560.1-202ENST00000421324 PUS7Q96PZ0 661 aaKnown RBP10.6□□□□□ -0.71
AC012560.1-202ENST00000421324 FCHSD2O94868 740 aa10.59□□□□□ -0.71
AC012560.1-202ENST00000421324 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
AC012560.1-202ENST00000421324 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
AC012560.1-202ENST00000421324 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
AC012560.1-202ENST00000421324 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 GPR37O15354 613 aa10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 ZC3H6P61129 1189 aaKnown RBP10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 HDGFL2Q7Z4V5 671 aaPredicted RBP10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 TESK2Q96S53 571 aa10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 EYA1Q99502 592 aa10.58□□□□□ -0.72
AC012560.1-202ENST00000421324 TMF1P82094 1093 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 VPS72Q15906 364 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 SLC12A5Q9H2X9 1139 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 BTG4Q9NY30 223 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 TERF2IPQ9NYB0 399 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 ATRNO75882 1429 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 USP6P35125 1406 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 TOPAZ1Q8N9V7 1692 aa10.57□□□□□ -0.72
AC012560.1-202ENST00000421324 CDK12Q9NYV4 1490 aaPredicted RBP10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 KTN1Q86UP2 1357 aaKnown RBP10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 USP47Q96K76 1375 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 GCP02774 474 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 SLIT2O94813 1529 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 TTC21BQ7Z4L5 1316 aa10.56□□□□□ -0.72
AC012560.1-202ENST00000421324 EVA1CP58658 441 aa10.55□□□□□ -0.72
AC012560.1-202ENST00000421324 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
AC012560.1-202ENST00000421324 TTC21AQ8NDW8 1320 aa10.55□□□□□ -0.72
AC012560.1-202ENST00000421324 KIAA0232Q92628 1395 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 CPSF1Q10570 1443 aaKnown RBP10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 CHRNA2Q15822 529 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 ADGRG1Q9Y653 693 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 USP19O94966 1318 aa10.54□□□□□ -0.72
AC012560.1-202ENST00000421324 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
AC012560.1-202ENST00000421324 HIC1Q14526 733 aa10.53□□□□□ -0.72
AC012560.1-202ENST00000421324 KCNH5Q8NCM2 988 aa10.53□□□□□ -0.72
AC012560.1-202ENST00000421324 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
AC012560.1-202ENST00000421324 RGS12O14924 1447 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 SSH2Q76I76 1423 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 A0A0G2JS52 829 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 EIF4G2P78344 907 aaKnown RBP eCLIP10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 MYT1Q01538 1121 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
AC012560.1-202ENST00000421324 SEPT12Q8IYM1 358 aa10.51□□□□□ -0.73
AC012560.1-202ENST00000421324 TSR3Q9UJK0 312 aaKnown RBP10.51□□□□□ -0.73
AC012560.1-202ENST00000421324 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
AC012560.1-202ENST00000421324 CPDO75976 1380 aa10.51□□□□□ -0.73
AC012560.1-202ENST00000421324 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
AC012560.1-202ENST00000421324 FECHP22830 423 aa10.5□□□□□ -0.73
AC012560.1-202ENST00000421324 SPATA31A5Q5VU36 1347 aa10.5□□□□□ -0.73
AC012560.1-202ENST00000421324 SPATA31A7Q8IWB4 1347 aa10.5□□□□□ -0.73
AC012560.1-202ENST00000421324 ABCA3Q99758 1704 aa10.5□□□□□ -0.73
AC012560.1-202ENST00000421324 GNPATO15228 680 aa10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 NME9Q86XW9 330 aa10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 NWD2Q9ULI1 1742 aa10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
AC012560.1-202ENST00000421324 PLCH1Q4KWH8 1693 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 HSPA5P11021 654 aaKnown RBP10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 ARHGEF25Q86VW2 580 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms