RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 TJP1Q07157 1748 aa19.15■□□□□ 0.66
PTPN18-204ENST00000420717 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
PTPN18-204ENST00000420717 CABP4P57796 275 aa19.15■□□□□ 0.66
PTPN18-204ENST00000420717 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
PTPN18-204ENST00000420717 LGR6Q9HBX8 967 aa19.15■□□□□ 0.66
PTPN18-204ENST00000420717 LRRC4BQ9NT99 713 aa19.15■□□□□ 0.66
PTPN18-204ENST00000420717 C4BP0C0L5 1744 aa19.14■□□□□ 0.66
PTPN18-204ENST00000420717 NEFMP07197 916 aa19.14■□□□□ 0.65
PTPN18-204ENST00000420717 NFE2L2Q16236 605 aa19.14■□□□□ 0.65
PTPN18-204ENST00000420717 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
PTPN18-204ENST00000420717 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
PTPN18-204ENST00000420717 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
PTPN18-204ENST00000420717 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
PTPN18-204ENST00000420717 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
PTPN18-204ENST00000420717 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
PTPN18-204ENST00000420717 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
PTPN18-204ENST00000420717 ADAMTS8Q9UP79 889 aa19.13■□□□□ 0.65
PTPN18-204ENST00000420717 KDM3BQ7LBC6 1761 aa19.12■□□□□ 0.65
PTPN18-204ENST00000420717 NBPF14Q5TI25 921 aa19.12■□□□□ 0.65
PTPN18-204ENST00000420717 LRP5O75197 1615 aa19.11■□□□□ 0.65
PTPN18-204ENST00000420717 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
PTPN18-204ENST00000420717 RUNDC1Q96C34 613 aa19.11■□□□□ 0.65
PTPN18-204ENST00000420717 CCNL1Q9UK58 526 aaPredicted RBP19.11■□□□□ 0.65
PTPN18-204ENST00000420717 UBR3Q6ZT12 1888 aa19.1■□□□□ 0.65
PTPN18-204ENST00000420717 LOC102724428A0A0B4J2F2 783 aa19.1■□□□□ 0.65
PTPN18-204ENST00000420717 SIK1P57059 783 aa19.1■□□□□ 0.65
PTPN18-204ENST00000420717 AKT1S1Q96B36 256 aa19.1■□□□□ 0.65
PTPN18-204ENST00000420717 COL24A1Q17RW2 1714 aa19.09■□□□□ 0.65
PTPN18-204ENST00000420717 TEFQ10587 303 aa19.08■□□□□ 0.64
PTPN18-204ENST00000420717 SLC15A2Q16348 729 aa19.08■□□□□ 0.64
PTPN18-204ENST00000420717 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
PTPN18-204ENST00000420717 TMPOP42166 694 aaKnown RBP19.07■□□□□ 0.64
PTPN18-204ENST00000420717 ZNF827Q17R98 1081 aa19.07■□□□□ 0.64
PTPN18-204ENST00000420717 RTF1Q92541 710 aaKnown RBP19.07■□□□□ 0.64
PTPN18-204ENST00000420717 SLC4A9Q96Q91 983 aa19.07■□□□□ 0.64
PTPN18-204ENST00000420717 STK32BQ9NY57 414 aa19.07■□□□□ 0.64
PTPN18-204ENST00000420717 LMOD3Q0VAK6 560 aa19.05■□□□□ 0.64
PTPN18-204ENST00000420717 ITPK1Q13572 414 aa19.05■□□□□ 0.64
PTPN18-204ENST00000420717 R3HDM1Q15032 1099 aaKnown RBP19.05■□□□□ 0.64
PTPN18-204ENST00000420717 MCM10Q7L590 875 aa19.05■□□□□ 0.64
PTPN18-204ENST00000420717 NCBP3Q53F19 620 aaKnown RBP19.04■□□□□ 0.64
PTPN18-204ENST00000420717 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
PTPN18-204ENST00000420717 LAMB4A4D0S4 1761 aa19.04■□□□□ 0.64
PTPN18-204ENST00000420717 CNTNAP4Q9C0A0 1308 aa19.03■□□□□ 0.64
PTPN18-204ENST00000420717 MYH14Q7Z406 1995 aaKnown RBP19.03■□□□□ 0.64
PTPN18-204ENST00000420717 KCNQ4P56696 695 aa19.03■□□□□ 0.64
PTPN18-204ENST00000420717 ZNF790Q6PG37 636 aa19.03■□□□□ 0.64
PTPN18-204ENST00000420717 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
PTPN18-204ENST00000420717 PSDA5PKW4 1024 aaPredicted RBP19.02■□□□□ 0.64
PTPN18-204ENST00000420717 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
PTPN18-204ENST00000420717 ATP6V1AP38606 617 aa19.02■□□□□ 0.64
PTPN18-204ENST00000420717 RIPK4P57078 832 aa19.02■□□□□ 0.64
PTPN18-204ENST00000420717 LINC00116Q8NCU8 138 aa19.02■□□□□ 0.64
PTPN18-204ENST00000420717 DCTN1Q14203 1278 aa19.01■□□□□ 0.63
PTPN18-204ENST00000420717 RC3H1Q5TC82 1133 aaKnown RBP19.01■□□□□ 0.63
PTPN18-204ENST00000420717 BABAM1Q9NWV8 329 aa19.01■□□□□ 0.63
PTPN18-204ENST00000420717 HEG1Q9ULI3 1381 aa19.01■□□□□ 0.63
PTPN18-204ENST00000420717 PNPLA7Q6ZV29 1317 aa19■□□□□ 0.63
PTPN18-204ENST00000420717 SLC39A6Q13433 755 aa19■□□□□ 0.63
PTPN18-204ENST00000420717 TAF7Q15545 349 aaPredicted RBP19■□□□□ 0.63
PTPN18-204ENST00000420717 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
PTPN18-204ENST00000420717 C4AP0C0L4 1744 aa19■□□□□ 0.63
PTPN18-204ENST00000420717 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
PTPN18-204ENST00000420717 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
PTPN18-204ENST00000420717 RBM42Q9BTD8 480 aaKnown RBP18.99■□□□□ 0.63
PTPN18-204ENST00000420717 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
PTPN18-204ENST00000420717 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
PTPN18-204ENST00000420717 APAF1O14727 1248 aa18.97■□□□□ 0.63
PTPN18-204ENST00000420717 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
PTPN18-204ENST00000420717 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
PTPN18-204ENST00000420717 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
PTPN18-204ENST00000420717 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
PTPN18-204ENST00000420717 SSFA2P28290 1259 aa18.96■□□□□ 0.63
PTPN18-204ENST00000420717 THUMPD2Q9BTF0 503 aaKnown RBP18.96■□□□□ 0.63
PTPN18-204ENST00000420717 TFCP2L1Q9NZI6 479 aa18.96■□□□□ 0.63
PTPN18-204ENST00000420717 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
PTPN18-204ENST00000420717 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
PTPN18-204ENST00000420717 AK7Q96M32 723 aa18.95■□□□□ 0.62
PTPN18-204ENST00000420717 KCNQ3O43525 872 aa18.94■□□□□ 0.62
PTPN18-204ENST00000420717 CYP19A1P11511 503 aaPredicted RBP18.94■□□□□ 0.62
PTPN18-204ENST00000420717 ADRA2BP18089 450 aa18.94■□□□□ 0.62
PTPN18-204ENST00000420717 AMIGO3Q86WK7 504 aa18.94■□□□□ 0.62
PTPN18-204ENST00000420717 DNAJC10Q8IXB1 793 aa18.94■□□□□ 0.62
PTPN18-204ENST00000420717 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
PTPN18-204ENST00000420717 PDGFDQ9GZP0 370 aaPredicted RBP18.94■□□□□ 0.62
PTPN18-204ENST00000420717 SRCAPQ6ZRS2 3230 aa18.93■□□□□ 0.62
PTPN18-204ENST00000420717 CRKLP46109 303 aaKnown RBP18.93■□□□□ 0.62
PTPN18-204ENST00000420717 NGEFQ8N5V2 710 aa18.93■□□□□ 0.62
PTPN18-204ENST00000420717 INTS5Q6P9B9 1019 aaKnown RBP18.92■□□□□ 0.62
PTPN18-204ENST00000420717 MTFR1LQ9H019 292 aa18.92■□□□□ 0.62
PTPN18-204ENST00000420717 CHL1O00533 1208 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 GNPATO15228 680 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 RPS6KA4O75676 772 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 CALD1Q05682 793 aaKnown RBP18.91■□□□□ 0.62
PTPN18-204ENST00000420717 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 COL23A1Q86Y22 540 aaPredicted RBP18.91■□□□□ 0.62
PTPN18-204ENST00000420717 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 SCN7AQ01118 1682 aa18.91■□□□□ 0.62
PTPN18-204ENST00000420717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
PTPN18-204ENST00000420717 SNRPA1P09661 255 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms