RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
SCAP-205ENST00000420588 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
SCAP-205ENST00000420588 BTAF1O14981 1849 aa18.14■□□□□ 0.5
SCAP-205ENST00000420588 ITGB4P16144 1822 aa18.14■□□□□ 0.5
SCAP-205ENST00000420588 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.49
SCAP-205ENST00000420588 SENP3-EIF4A1A0A087X0R7 540 aa18.13■□□□□ 0.49
SCAP-205ENST00000420588 BTBD11A6QL63 1104 aa18.13■□□□□ 0.49
SCAP-205ENST00000420588 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
SCAP-205ENST00000420588 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
SCAP-205ENST00000420588 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
SCAP-205ENST00000420588 PALLDQ8WX93 1383 aa18.13■□□□□ 0.49
SCAP-205ENST00000420588 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
SCAP-205ENST00000420588 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
SCAP-205ENST00000420588 SLC27A3Q5K4L6 730 aa18.12■□□□□ 0.49
SCAP-205ENST00000420588 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
SCAP-205ENST00000420588 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
SCAP-205ENST00000420588 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
SCAP-205ENST00000420588 PROM2Q8N271 834 aa18.11■□□□□ 0.49
SCAP-205ENST00000420588 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
SCAP-205ENST00000420588 SALL2Q9Y467 1007 aaPredicted RBP18.11■□□□□ 0.49
SCAP-205ENST00000420588 HMGB2P26583 209 aaKnown RBP18.1■□□□□ 0.49
SCAP-205ENST00000420588 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
SCAP-205ENST00000420588 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
SCAP-205ENST00000420588 LOC102724428A0A0B4J2F2 783 aa18.09■□□□□ 0.49
SCAP-205ENST00000420588 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
SCAP-205ENST00000420588 KCNQ4P56696 695 aa18.09■□□□□ 0.49
SCAP-205ENST00000420588 SIK1P57059 783 aa18.09■□□□□ 0.49
SCAP-205ENST00000420588 LAS1LQ9Y4W2 734 aaKnown RBP18.09■□□□□ 0.49
SCAP-205ENST00000420588 MRC1P22897 1456 aa18.08■□□□□ 0.49
SCAP-205ENST00000420588 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
SCAP-205ENST00000420588 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
SCAP-205ENST00000420588 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
SCAP-205ENST00000420588 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.48
SCAP-205ENST00000420588 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
SCAP-205ENST00000420588 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
SCAP-205ENST00000420588 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
SCAP-205ENST00000420588 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
SCAP-205ENST00000420588 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
SCAP-205ENST00000420588 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
SCAP-205ENST00000420588 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
SCAP-205ENST00000420588 TSPYL4Q9UJ04 414 aa18.05■□□□□ 0.48
SCAP-205ENST00000420588 KCNQ3O43525 872 aa18.04■□□□□ 0.48
SCAP-205ENST00000420588 WWC1Q8IX03 1113 aa18.04■□□□□ 0.48
SCAP-205ENST00000420588 RGPD3A6NKT7 1758 aaPredicted RBP18.04■□□□□ 0.48
SCAP-205ENST00000420588 RGPD4Q7Z3J3 1758 aa18.04■□□□□ 0.48
SCAP-205ENST00000420588 ZNF496Q96IT1 587 aaPredicted RBP18.03■□□□□ 0.48
SCAP-205ENST00000420588 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
SCAP-205ENST00000420588 ITPK1Q13572 414 aa18.02■□□□□ 0.48
SCAP-205ENST00000420588 SLC4A9Q96Q91 983 aa18.02■□□□□ 0.48
SCAP-205ENST00000420588 LY75O60449 1722 aa18.01■□□□□ 0.47
SCAP-205ENST00000420588 CHL1O00533 1208 aa18.01■□□□□ 0.47
SCAP-205ENST00000420588 GNAI1P63096 354 aa18.01■□□□□ 0.47
SCAP-205ENST00000420588 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
SCAP-205ENST00000420588 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
SCAP-205ENST00000420588 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
SCAP-205ENST00000420588 SLC15A2Q16348 729 aa18■□□□□ 0.47
SCAP-205ENST00000420588 DNAJC10Q8IXB1 793 aa18■□□□□ 0.47
SCAP-205ENST00000420588 AK7Q96M32 723 aa18■□□□□ 0.47
SCAP-205ENST00000420588 IFT57Q9NWB7 429 aa18■□□□□ 0.47
SCAP-205ENST00000420588 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
SCAP-205ENST00000420588 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
SCAP-205ENST00000420588 SNRPA1P09661 255 aaKnown RBP17.99■□□□□ 0.47
SCAP-205ENST00000420588 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
SCAP-205ENST00000420588 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
SCAP-205ENST00000420588 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
SCAP-205ENST00000420588 ANO8Q9HCE9 1232 aaPredicted RBP17.99■□□□□ 0.47
SCAP-205ENST00000420588 HEG1Q9ULI3 1381 aa17.99■□□□□ 0.47
SCAP-205ENST00000420588 RREB1Q92766 1687 aa17.99■□□□□ 0.47
SCAP-205ENST00000420588 STARD3NLO95772 234 aa17.98■□□□□ 0.47
SCAP-205ENST00000420588 EIF4A1P60842 406 aaKnown RBP17.98■□□□□ 0.47
SCAP-205ENST00000420588 PSDA5PKW4 1024 aaPredicted RBP17.97■□□□□ 0.47
SCAP-205ENST00000420588 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
SCAP-205ENST00000420588 AKT1S1Q96B36 256 aa17.97■□□□□ 0.47
SCAP-205ENST00000420588 NUP188Q5SRE5 1749 aa17.97■□□□□ 0.47
SCAP-205ENST00000420588 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
SCAP-205ENST00000420588 IL16Q14005 1332 aa17.97■□□□□ 0.47
SCAP-205ENST00000420588 ZNF853P0CG23 659 aa17.96■□□□□ 0.47
SCAP-205ENST00000420588 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
SCAP-205ENST00000420588 PAPPAQ13219 1627 aa17.96■□□□□ 0.47
SCAP-205ENST00000420588 GNPATO15228 680 aa17.95■□□□□ 0.46
SCAP-205ENST00000420588 MSH5O43196 834 aa17.95■□□□□ 0.46
SCAP-205ENST00000420588 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
SCAP-205ENST00000420588 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
SCAP-205ENST00000420588 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCAP-205ENST00000420588 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
SCAP-205ENST00000420588 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
SCAP-205ENST00000420588 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
SCAP-205ENST00000420588 RTCBQ9Y3I0 505 aaKnown RBP17.94■□□□□ 0.46
SCAP-205ENST00000420588 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
SCAP-205ENST00000420588 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
SCAP-205ENST00000420588 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
SCAP-205ENST00000420588 FLAD1Q8NFF5 587 aa17.93■□□□□ 0.46
SCAP-205ENST00000420588 PHF14O94880 888 aa17.92■□□□□ 0.46
SCAP-205ENST00000420588 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
SCAP-205ENST00000420588 GOLGA2Q08379 1002 aa17.92■□□□□ 0.46
SCAP-205ENST00000420588 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
SCAP-205ENST00000420588 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
SCAP-205ENST00000420588 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
SCAP-205ENST00000420588 C5P01031 1676 aa17.92■□□□□ 0.46
SCAP-205ENST00000420588 ZNF831Q5JPB2 1677 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms