RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 CEMIPQ8WUJ3 1361 aa27.3■■□□□ 1.96
HMGXB4-203ENST00000420166 SIPA1L3O60292 1781 aaPredicted RBP27.3■■□□□ 1.96
HMGXB4-203ENST00000420166 ASAP1Q9ULH1 1129 aa27.29■■□□□ 1.96
HMGXB4-203ENST00000420166 HTATSF1O43719 755 aaKnown RBP27.28■■□□□ 1.96
HMGXB4-203ENST00000420166 RTF1Q92541 710 aaKnown RBP27.28■■□□□ 1.96
HMGXB4-203ENST00000420166 ATG3Q9NT62 314 aa27.28■■□□□ 1.96
HMGXB4-203ENST00000420166 PAPPAQ13219 1627 aa27.27■■□□□ 1.96
HMGXB4-203ENST00000420166 SLC27A3Q5K4L6 730 aa27.26■■□□□ 1.95
HMGXB4-203ENST00000420166 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
HMGXB4-203ENST00000420166 TEFQ10587 303 aa27.25■■□□□ 1.95
HMGXB4-203ENST00000420166 MCM10Q7L590 875 aa27.25■■□□□ 1.95
HMGXB4-203ENST00000420166 LRRC4BQ9NT99 713 aa27.25■■□□□ 1.95
HMGXB4-203ENST00000420166 CCNL1Q9UK58 526 aaPredicted RBP27.24■■□□□ 1.95
HMGXB4-203ENST00000420166 DCTN1Q14203 1278 aa27.23■■□□□ 1.95
HMGXB4-203ENST00000420166 TAF1LQ8IZX4 1826 aa27.23■■□□□ 1.95
HMGXB4-203ENST00000420166 KCNQ4P56696 695 aa27.22■■□□□ 1.95
HMGXB4-203ENST00000420166 RIPK4P57078 832 aa27.22■■□□□ 1.95
HMGXB4-203ENST00000420166 RRP7AQ9Y3A4 280 aaKnown RBP27.21■■□□□ 1.95
HMGXB4-203ENST00000420166 C5P01031 1676 aa27.21■■□□□ 1.95
HMGXB4-203ENST00000420166 ZNF831Q5JPB2 1677 aa27.21■■□□□ 1.95
HMGXB4-203ENST00000420166 LOC102724428A0A0B4J2F2 783 aa27.2■■□□□ 1.94
HMGXB4-203ENST00000420166 CCER2I3L3R5 266 aa27.2■■□□□ 1.94
HMGXB4-203ENST00000420166 SIK1P57059 783 aa27.2■■□□□ 1.94
HMGXB4-203ENST00000420166 NBPF14Q5TI25 921 aa27.2■■□□□ 1.94
HMGXB4-203ENST00000420166 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
HMGXB4-203ENST00000420166 ANO8Q9HCE9 1232 aaPredicted RBP27.19■■□□□ 1.94
HMGXB4-203ENST00000420166 UBR2Q8IWV8 1755 aa27.19■■□□□ 1.94
HMGXB4-203ENST00000420166 SLC39A6Q13433 755 aa27.18■■□□□ 1.94
HMGXB4-203ENST00000420166 NEUROD2Q15784 382 aa27.18■■□□□ 1.94
HMGXB4-203ENST00000420166 APAF1O14727 1248 aa27.17■■□□□ 1.94
HMGXB4-203ENST00000420166 RBM42Q9BTD8 480 aaKnown RBP27.17■■□□□ 1.94
HMGXB4-203ENST00000420166 THUMPD2Q9BTF0 503 aaKnown RBP27.17■■□□□ 1.94
HMGXB4-203ENST00000420166 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
HMGXB4-203ENST00000420166 PTCD1O75127 700 aaKnown RBP27.15■■□□□ 1.94
HMGXB4-203ENST00000420166 FAM9BQ8IZU0 186 aa27.15■■□□□ 1.94
HMGXB4-203ENST00000420166 MIER1Q8N108 512 aa27.15■■□□□ 1.94
HMGXB4-203ENST00000420166 CICQ96RK0 1608 aaPredicted RBP27.15■■□□□ 1.94
HMGXB4-203ENST00000420166 SLC4A9Q96Q91 983 aa27.14■■□□□ 1.94
HMGXB4-203ENST00000420166 STK32BQ9NY57 414 aa27.14■■□□□ 1.94
HMGXB4-203ENST00000420166 HMGB2P26583 209 aaKnown RBP27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 ATP6V1AP38606 617 aa27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 R3HDM1Q15032 1099 aaKnown RBP27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 TRIM35Q9UPQ4 493 aa27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 COL5A3P25940 1745 aaPredicted RBP27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 TJP1Q07157 1748 aa27.13■■□□□ 1.93
HMGXB4-203ENST00000420166 BTBD11A6QL63 1104 aa27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 ITPK1Q13572 414 aa27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 TAF7Q15545 349 aaPredicted RBP27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 ZNF827Q17R98 1081 aa27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 ZNF790Q6PG37 636 aa27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 TTC5Q8N0Z6 440 aa27.12■■□□□ 1.93
HMGXB4-203ENST00000420166 TUBGCP6Q96RT7 1819 aa27.11■■□□□ 1.93
HMGXB4-203ENST00000420166 PSDA5PKW4 1024 aaPredicted RBP27.11■■□□□ 1.93
HMGXB4-203ENST00000420166 SLC15A2Q16348 729 aa27.11■■□□□ 1.93
HMGXB4-203ENST00000420166 AKT1S1Q96B36 256 aa27.11■■□□□ 1.93
HMGXB4-203ENST00000420166 KDM3BQ7LBC6 1761 aa27.1■■□□□ 1.93
HMGXB4-203ENST00000420166 QSER1Q2KHR3 1735 aa27.1■■□□□ 1.93
HMGXB4-203ENST00000420166 LINC00116Q8NCU8 138 aa27.09■■□□□ 1.93
HMGXB4-203ENST00000420166 KCNQ3O43525 872 aa27.07■■□□□ 1.92
HMGXB4-203ENST00000420166 ZNF496Q96IT1 587 aaPredicted RBP27.07■■□□□ 1.92
HMGXB4-203ENST00000420166 UBR3Q6ZT12 1888 aa27.05■■□□□ 1.92
HMGXB4-203ENST00000420166 VSIG10Q8N0Z9 540 aa27.05■■□□□ 1.92
HMGXB4-203ENST00000420166 MIS18AQ9NYP9 233 aa27.05■■□□□ 1.92
HMGXB4-203ENST00000420166 MYH14Q7Z406 1995 aaKnown RBP27.05■■□□□ 1.92
HMGXB4-203ENST00000420166 CASZ1Q86V15 1759 aa27.04■■□□□ 1.92
HMGXB4-203ENST00000420166 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
HMGXB4-203ENST00000420166 HEG1Q9ULI3 1381 aa27.04■■□□□ 1.92
HMGXB4-203ENST00000420166 SENP3-EIF4A1A0A087X0R7 540 aa27.03■■□□□ 1.92
HMGXB4-203ENST00000420166 DNAJC10Q8IXB1 793 aa27.03■■□□□ 1.92
HMGXB4-203ENST00000420166 AK7Q96M32 723 aa27.03■■□□□ 1.92
HMGXB4-203ENST00000420166 TFCP2L1Q9NZI6 479 aa27.03■■□□□ 1.92
HMGXB4-203ENST00000420166 CNTNAP4Q9C0A0 1308 aa27.02■■□□□ 1.92
HMGXB4-203ENST00000420166 NCBP3Q53F19 620 aaKnown RBP27.02■■□□□ 1.92
HMGXB4-203ENST00000420166 CCDC27Q2M243 656 aa27.01■■□□□ 1.91
HMGXB4-203ENST00000420166 BABAM1Q9NWV8 329 aa27.01■■□□□ 1.91
HMGXB4-203ENST00000420166 RC3H1Q5TC82 1133 aaKnown RBP27■■□□□ 1.91
HMGXB4-203ENST00000420166 TSPYL4Q9UJ04 414 aa27■■□□□ 1.91
HMGXB4-203ENST00000420166 PNPLA7Q6ZV29 1317 aa26.99■■□□□ 1.91
HMGXB4-203ENST00000420166 CRKLP46109 303 aaKnown RBP26.98■■□□□ 1.91
HMGXB4-203ENST00000420166 CALD1Q05682 793 aaKnown RBP26.98■■□□□ 1.91
HMGXB4-203ENST00000420166 CHL1O00533 1208 aa26.97■■□□□ 1.91
HMGXB4-203ENST00000420166 GNPATO15228 680 aa26.97■■□□□ 1.91
HMGXB4-203ENST00000420166 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
HMGXB4-203ENST00000420166 PDGFDQ9GZP0 370 aaPredicted RBP26.97■■□□□ 1.91
HMGXB4-203ENST00000420166 EIF4A1P60842 406 aaKnown RBP26.96■■□□□ 1.91
HMGXB4-203ENST00000420166 AMIGO3Q86WK7 504 aa26.96■■□□□ 1.91
HMGXB4-203ENST00000420166 WWC1Q8IX03 1113 aa26.96■■□□□ 1.91
HMGXB4-203ENST00000420166 TEX13AQ9BXU3 409 aaPredicted RBP26.96■■□□□ 1.91
HMGXB4-203ENST00000420166 LAS1LQ9Y4W2 734 aaKnown RBP26.96■■□□□ 1.91
HMGXB4-203ENST00000420166 LAMB4A4D0S4 1761 aa26.95■■□□□ 1.9
HMGXB4-203ENST00000420166 SNRPA1P09661 255 aaKnown RBP26.95■■□□□ 1.9
HMGXB4-203ENST00000420166 NGEFQ8N5V2 710 aa26.95■■□□□ 1.9
HMGXB4-203ENST00000420166 CFAP44Q96MT7 982 aa26.95■■□□□ 1.9
HMGXB4-203ENST00000420166 STARD3NLO95772 234 aa26.94■■□□□ 1.9
HMGXB4-203ENST00000420166 SSFA2P28290 1259 aa26.94■■□□□ 1.9
HMGXB4-203ENST00000420166 FLAD1Q8NFF5 587 aa26.94■■□□□ 1.9
HMGXB4-203ENST00000420166 CCDC87Q9NVE4 849 aa26.94■■□□□ 1.9
HMGXB4-203ENST00000420166 ZNF853P0CG23 659 aa26.93■■□□□ 1.9
HMGXB4-203ENST00000420166 INTS5Q6P9B9 1019 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms