RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ERVV-2B6SEH9 535 aa16.77■□□□□ 0.28
ATG4B-208ENST00000419606 CABP4P57796 275 aa16.77■□□□□ 0.28
ATG4B-208ENST00000419606 TEFQ10587 303 aa16.77■□□□□ 0.28
ATG4B-208ENST00000419606 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-208ENST00000419606 NHSQ6T4R5 1651 aa16.76■□□□□ 0.27
ATG4B-208ENST00000419606 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
ATG4B-208ENST00000419606 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
ATG4B-208ENST00000419606 TAF7Q15545 349 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-208ENST00000419606 PIGBQ92521 554 aa16.76■□□□□ 0.27
ATG4B-208ENST00000419606 KCNQ3O43525 872 aa16.75■□□□□ 0.27
ATG4B-208ENST00000419606 SLC39A6Q13433 755 aa16.75■□□□□ 0.27
ATG4B-208ENST00000419606 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
ATG4B-208ENST00000419606 KDM3BQ7LBC6 1761 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 IL16Q14005 1332 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 BCL9O00512 1426 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 CHL1O00533 1208 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 TMOD3Q9NYL9 352 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
ATG4B-208ENST00000419606 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 IFT57Q9NWB7 429 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 BTAF1O14981 1849 aa16.73■□□□□ 0.27
ATG4B-208ENST00000419606 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
ATG4B-208ENST00000419606 TSPYL4Q9UJ04 414 aa16.72■□□□□ 0.27
ATG4B-208ENST00000419606 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
ATG4B-208ENST00000419606 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
ATG4B-208ENST00000419606 TRIM37O94972 964 aa16.71■□□□□ 0.27
ATG4B-208ENST00000419606 GNAI1P63096 354 aa16.71■□□□□ 0.27
ATG4B-208ENST00000419606 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
ATG4B-208ENST00000419606 E9PSI1 815 aa16.7■□□□□ 0.26
ATG4B-208ENST00000419606 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
ATG4B-208ENST00000419606 DUSP27Q5VZP5 1158 aa16.7■□□□□ 0.26
ATG4B-208ENST00000419606 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
ATG4B-208ENST00000419606 ZNF790Q6PG37 636 aa16.69■□□□□ 0.26
ATG4B-208ENST00000419606 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
ATG4B-208ENST00000419606 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-208ENST00000419606 MYH16Q9H6N6 1097 aa16.68■□□□□ 0.26
ATG4B-208ENST00000419606 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
ATG4B-208ENST00000419606 EP400Q96L91 3159 aa16.68■□□□□ 0.26
ATG4B-208ENST00000419606 TNS1Q9HBL0 1735 aaKnown RBP16.67■□□□□ 0.26
ATG4B-208ENST00000419606 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
ATG4B-208ENST00000419606 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
ATG4B-208ENST00000419606 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
ATG4B-208ENST00000419606 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
ATG4B-208ENST00000419606 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
ATG4B-208ENST00000419606 ZNF496Q96IT1 587 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-208ENST00000419606 BABAM1Q9NWV8 329 aa16.66■□□□□ 0.26
ATG4B-208ENST00000419606 C5P01031 1676 aa16.65■□□□□ 0.26
ATG4B-208ENST00000419606 PRAMEF22A3QJZ6 481 aa16.65■□□□□ 0.26
ATG4B-208ENST00000419606 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-208ENST00000419606 SLC4A9Q96Q91 983 aa16.65■□□□□ 0.26
ATG4B-208ENST00000419606 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
ATG4B-208ENST00000419606 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
ATG4B-208ENST00000419606 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
ATG4B-208ENST00000419606 KCNQ4P56696 695 aa16.63■□□□□ 0.25
ATG4B-208ENST00000419606 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
ATG4B-208ENST00000419606 LY75O60449 1722 aa16.62■□□□□ 0.25
ATG4B-208ENST00000419606 TJP1Q07157 1748 aa16.62■□□□□ 0.25
ATG4B-208ENST00000419606 APBA3O96018 575 aa16.61■□□□□ 0.25
ATG4B-208ENST00000419606 FMNL2Q96PY5 1086 aa16.61■□□□□ 0.25
ATG4B-208ENST00000419606 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-208ENST00000419606 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-208ENST00000419606 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
ATG4B-208ENST00000419606 VAMP4O75379 141 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 SIK1P57059 783 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 ITPK1Q13572 414 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 TWISTNBQ3B726 338 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-208ENST00000419606 DNAJC10Q8IXB1 793 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
ATG4B-208ENST00000419606 PROM2Q8N271 834 aa16.58■□□□□ 0.24
ATG4B-208ENST00000419606 LAMB4A4D0S4 1761 aa16.58■□□□□ 0.24
ATG4B-208ENST00000419606 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
ATG4B-208ENST00000419606 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
ATG4B-208ENST00000419606 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
ATG4B-208ENST00000419606 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
ATG4B-208ENST00000419606 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-208ENST00000419606 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-208ENST00000419606 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
ATG4B-208ENST00000419606 PLSCR1O15162 318 aa16.55■□□□□ 0.24
ATG4B-208ENST00000419606 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-208ENST00000419606 EN1Q05925 392 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-208ENST00000419606 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
ATG4B-208ENST00000419606 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
ATG4B-208ENST00000419606 CCNL1Q9UK58 526 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-208ENST00000419606 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
ATG4B-208ENST00000419606 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
ATG4B-208ENST00000419606 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
ATG4B-208ENST00000419606 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
ATG4B-208ENST00000419606 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
ATG4B-208ENST00000419606 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATG4B-208ENST00000419606 ANXA1P04083 346 aa16.53■□□□□ 0.24
ATG4B-208ENST00000419606 A1BGP04217 495 aa16.53■□□□□ 0.24
ATG4B-208ENST00000419606 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-208ENST00000419606 CAMKK2Q96RR4 588 aa16.53■□□□□ 0.24
ATG4B-208ENST00000419606 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms