RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
EPCAM-203ENST00000419334 IL17REQ8NFR9 667 aa23.39■■□□□ 1.33
EPCAM-203ENST00000419334 ATG3Q9NT62 314 aa23.39■■□□□ 1.33
EPCAM-203ENST00000419334 CCNL1Q9UK58 526 aaPredicted RBP23.39■■□□□ 1.33
EPCAM-203ENST00000419334 C5P01031 1676 aa23.38■■□□□ 1.33
EPCAM-203ENST00000419334 HTATSF1O43719 755 aaKnown RBP23.38■■□□□ 1.33
EPCAM-203ENST00000419334 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
EPCAM-203ENST00000419334 NFE2L2Q16236 605 aa23.37■■□□□ 1.33
EPCAM-203ENST00000419334 RTF1Q92541 710 aaKnown RBP23.36■■□□□ 1.33
EPCAM-203ENST00000419334 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
EPCAM-203ENST00000419334 MRS2Q9HD23 443 aa23.36■■□□□ 1.33
EPCAM-203ENST00000419334 RUNDC1Q96C34 613 aa23.35■■□□□ 1.33
EPCAM-203ENST00000419334 LOC102724428A0A0B4J2F2 783 aa23.34■■□□□ 1.33
EPCAM-203ENST00000419334 HMGB2P26583 209 aaKnown RBP23.34■■□□□ 1.33
EPCAM-203ENST00000419334 KCNQ4P56696 695 aa23.34■■□□□ 1.33
EPCAM-203ENST00000419334 SIK1P57059 783 aa23.34■■□□□ 1.33
EPCAM-203ENST00000419334 TEFQ10587 303 aa23.34■■□□□ 1.33
EPCAM-203ENST00000419334 R3HDM1Q15032 1099 aaKnown RBP23.34■■□□□ 1.33
EPCAM-203ENST00000419334 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
EPCAM-203ENST00000419334 UBR2Q8IWV8 1755 aa23.33■■□□□ 1.33
EPCAM-203ENST00000419334 STK32BQ9NY57 414 aa23.33■■□□□ 1.33
EPCAM-203ENST00000419334 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.32
EPCAM-203ENST00000419334 CICQ96RK0 1608 aaPredicted RBP23.33■■□□□ 1.32
EPCAM-203ENST00000419334 PSDA5PKW4 1024 aaPredicted RBP23.32■■□□□ 1.32
EPCAM-203ENST00000419334 SLC15A2Q16348 729 aa23.32■■□□□ 1.32
EPCAM-203ENST00000419334 MCM10Q7L590 875 aa23.32■■□□□ 1.32
EPCAM-203ENST00000419334 PNISRQ8TF01 805 aaKnown RBP23.32■■□□□ 1.32
EPCAM-203ENST00000419334 TMPOP42166 694 aaKnown RBP23.31■■□□□ 1.32
EPCAM-203ENST00000419334 C4BP0C0L5 1744 aa23.3■■□□□ 1.32
EPCAM-203ENST00000419334 AKT1S1Q96B36 256 aa23.3■■□□□ 1.32
EPCAM-203ENST00000419334 TUBGCP6Q96RT7 1819 aa23.3■■□□□ 1.32
EPCAM-203ENST00000419334 COL5A3P25940 1745 aaPredicted RBP23.3■■□□□ 1.32
EPCAM-203ENST00000419334 KCPQ6ZWJ8 1503 aa23.29■■□□□ 1.32
EPCAM-203ENST00000419334 ATP6V1AP38606 617 aa23.29■■□□□ 1.32
EPCAM-203ENST00000419334 DCTN1Q14203 1278 aa23.29■■□□□ 1.32
EPCAM-203ENST00000419334 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
EPCAM-203ENST00000419334 RBM42Q9BTD8 480 aaKnown RBP23.29■■□□□ 1.32
EPCAM-203ENST00000419334 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
EPCAM-203ENST00000419334 RIPK4P57078 832 aa23.28■■□□□ 1.32
EPCAM-203ENST00000419334 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
EPCAM-203ENST00000419334 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
EPCAM-203ENST00000419334 TJP1Q07157 1748 aa23.28■■□□□ 1.32
EPCAM-203ENST00000419334 ITPK1Q13572 414 aa23.27■■□□□ 1.32
EPCAM-203ENST00000419334 PTCD1O75127 700 aaKnown RBP23.26■■□□□ 1.31
EPCAM-203ENST00000419334 LMOD3Q0VAK6 560 aa23.26■■□□□ 1.31
EPCAM-203ENST00000419334 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
EPCAM-203ENST00000419334 ZNF790Q6PG37 636 aa23.25■■□□□ 1.31
EPCAM-203ENST00000419334 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
EPCAM-203ENST00000419334 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
EPCAM-203ENST00000419334 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
EPCAM-203ENST00000419334 TTC5Q8N0Z6 440 aa23.24■■□□□ 1.31
EPCAM-203ENST00000419334 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
EPCAM-203ENST00000419334 KDM3BQ7LBC6 1761 aa23.23■■□□□ 1.31
EPCAM-203ENST00000419334 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
EPCAM-203ENST00000419334 APAF1O14727 1248 aa23.22■■□□□ 1.31
EPCAM-203ENST00000419334 NEUROD2Q15784 382 aa23.22■■□□□ 1.31
EPCAM-203ENST00000419334 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
EPCAM-203ENST00000419334 THUMPD2Q9BTF0 503 aaKnown RBP23.22■■□□□ 1.31
EPCAM-203ENST00000419334 TFCP2L1Q9NZI6 479 aa23.22■■□□□ 1.31
EPCAM-203ENST00000419334 MYH14Q7Z406 1995 aaKnown RBP23.2■■□□□ 1.3
EPCAM-203ENST00000419334 PNPLA7Q6ZV29 1317 aa23.2■■□□□ 1.3
EPCAM-203ENST00000419334 AK7Q96M32 723 aa23.2■■□□□ 1.3
EPCAM-203ENST00000419334 TRIM35Q9UPQ4 493 aa23.2■■□□□ 1.3
EPCAM-203ENST00000419334 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
EPCAM-203ENST00000419334 CCER2I3L3R5 266 aa23.19■■□□□ 1.3
EPCAM-203ENST00000419334 ZNF496Q96IT1 587 aaPredicted RBP23.19■■□□□ 1.3
EPCAM-203ENST00000419334 LRP5O75197 1615 aa23.19■■□□□ 1.3
EPCAM-203ENST00000419334 HEG1Q9ULI3 1381 aa23.18■■□□□ 1.3
EPCAM-203ENST00000419334 KCNQ3O43525 872 aa23.18■■□□□ 1.3
EPCAM-203ENST00000419334 RC3H1Q5TC82 1133 aaKnown RBP23.18■■□□□ 1.3
EPCAM-203ENST00000419334 FMNL2Q96PY5 1086 aa23.18■■□□□ 1.3
EPCAM-203ENST00000419334 PDGFDQ9GZP0 370 aaPredicted RBP23.18■■□□□ 1.3
EPCAM-203ENST00000419334 DNAJC10Q8IXB1 793 aa23.17■■□□□ 1.3
EPCAM-203ENST00000419334 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
EPCAM-203ENST00000419334 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
EPCAM-203ENST00000419334 BABAM1Q9NWV8 329 aa23.15■■□□□ 1.3
EPCAM-203ENST00000419334 GNPATO15228 680 aa23.14■■□□□ 1.29
EPCAM-203ENST00000419334 SSFA2P28290 1259 aa23.14■■□□□ 1.29
EPCAM-203ENST00000419334 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
EPCAM-203ENST00000419334 MIS18AQ9NYP9 233 aa23.14■■□□□ 1.29
EPCAM-203ENST00000419334 CYP19A1P11511 503 aaPredicted RBP23.13■■□□□ 1.29
EPCAM-203ENST00000419334 AMIGO3Q86WK7 504 aa23.13■■□□□ 1.29
EPCAM-203ENST00000419334 COL23A1Q86Y22 540 aaPredicted RBP23.13■■□□□ 1.29
EPCAM-203ENST00000419334 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
EPCAM-203ENST00000419334 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
EPCAM-203ENST00000419334 COL24A1Q17RW2 1714 aa23.12■■□□□ 1.29
EPCAM-203ENST00000419334 NCBP3Q53F19 620 aaKnown RBP23.12■■□□□ 1.29
EPCAM-203ENST00000419334 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
EPCAM-203ENST00000419334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.11■■□□□ 1.29
EPCAM-203ENST00000419334 RPS6KA4O75676 772 aa23.11■■□□□ 1.29
EPCAM-203ENST00000419334 MTFR1LQ9H019 292 aa23.11■■□□□ 1.29
EPCAM-203ENST00000419334 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
EPCAM-203ENST00000419334 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
EPCAM-203ENST00000419334 ZBTB7AO95365 584 aa23.1■■□□□ 1.29
EPCAM-203ENST00000419334 STARD3NLO95772 234 aa23.1■■□□□ 1.29
EPCAM-203ENST00000419334 CCDC27Q2M243 656 aa23.1■■□□□ 1.29
EPCAM-203ENST00000419334 INTS5Q6P9B9 1019 aaKnown RBP23.1■■□□□ 1.29
EPCAM-203ENST00000419334 SPON1Q9HCB6 807 aa23.1■■□□□ 1.29
EPCAM-203ENST00000419334 CCDC87Q9NVE4 849 aa23.1■■□□□ 1.29
EPCAM-203ENST00000419334 C4AP0C0L4 1744 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms