RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 LGR6Q9HBX8 967 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 NSD2O96028 1365 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 CKAP2LQ8IYA6 745 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 ARHGAP45Q92619 1136 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 CCDC85AQ96PX6 553 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
TNFRSF8-203ENST00000417814 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 CWF19L2Q2TBE0 894 aaKnown RBP15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 CCDC30Q5VVM6 783 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 DDX11Q96FC9 970 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 NPHP1O15259 732 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 ZNF592Q92610 1267 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 SBNO2Q9Y2G9 1366 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
TNFRSF8-203ENST00000417814 CHL1O00533 1208 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 EDC3Q96F86 508 aaKnown RBP15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 TSPY26PQ9H489 355 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 AMOTL2Q9Y2J4 779 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 IFIT2P09913 472 aaKnown RBP15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
TNFRSF8-203ENST00000417814 IQGAP1P46940 1657 aa15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 CHMLP26374 656 aa15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 KIAA2012Q0VF49 1180 aa15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 ZNF853P0CG23 659 aa15.92■□□□□ 0.14
TNFRSF8-203ENST00000417814 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 SLC39A6Q13433 755 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 SRCIN1Q9C0H9 1055 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 A0A087WWV3 80 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 GNAI3P08754 354 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 RAB11FIP4Q86YS3 637 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 CEP152O94986 1710 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 IQSEC2Q5JU85 1478 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 ESCO1Q5FWF5 840 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 AACSQ86V21 672 aa15.91■□□□□ 0.14
TNFRSF8-203ENST00000417814 MYOM1P52179 1685 aa15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 GNAT3A8MTJ3 354 aa15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 LTKP29376 864 aa15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 EID1Q9Y6B2 187 aa15.9■□□□□ 0.14
TNFRSF8-203ENST00000417814 GUCY1B3Q02153 619 aa15.89■□□□□ 0.13
TNFRSF8-203ENST00000417814 PSME1Q06323 249 aa15.89■□□□□ 0.13
TNFRSF8-203ENST00000417814 CHGBP05060 677 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 HDGFP51858 240 aaKnown RBP15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 AK2P54819 239 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 MYOM2P54296 1465 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 SETD1BQ9UPS6 1966 aaKnown RBP15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 CSB-PGBD3P0DP91 1061 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 RHPN1Q8TCX5 695 aa15.88■□□□□ 0.13
TNFRSF8-203ENST00000417814 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 ERCC4Q92889 916 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 KIF1BO60333 1816 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 PTMSP20962 102 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 FSD1Q9BTV5 496 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 LARGE1O95461 756 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 ADCY5O95622 1261 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 DDIT3P35638 169 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 LRSAM1Q6UWE0 723 aa15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 SYAP1Q96A49 352 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
TNFRSF8-203ENST00000417814 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 NEUROD6Q96NK8 337 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 MROH2AA6NES4 1674 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 EFCAB6Q5THR3 1501 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 GJB2P29033 226 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 CBX1P83916 185 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 ADCK5Q3MIX3 580 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
TNFRSF8-203ENST00000417814 BTBD11A6QL63 1104 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 PDCL3Q9H2J4 239 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 TET3O43151 1660 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 LRRC7Q96NW7 1537 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 PTH1RQ03431 593 aa15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 COL9A3Q14050 684 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 LARP1BQ659C4 914 aaKnown RBP15.85■□□□□ 0.13
TNFRSF8-203ENST00000417814 CHST3Q7LGC8 479 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms