RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 DOT1LQ8TEK3 1739 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 SHANK3Q9BYB0 1731 aa9.09□□□□□ -0.95
NCL-203ENST00000417652 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
NCL-203ENST00000417652 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
NCL-203ENST00000417652 TFCP2L1Q9NZI6 479 aa9.09□□□□□ -0.95
NCL-203ENST00000417652 PALLDQ8WX93 1383 aa9.09□□□□□ -0.95
NCL-203ENST00000417652 MAP3K5Q99683 1374 aa9.09□□□□□ -0.95
NCL-203ENST00000417652 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 ATG3Q9NT62 314 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 ITGB4P16144 1822 aa9.08□□□□□ -0.96
NCL-203ENST00000417652 LOC102724428A0A0B4J2F2 783 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 SIK1P57059 783 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 RIPK4P57078 832 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 MCM10Q7L590 875 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 RUNDC1Q96C34 613 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 AK7Q96M32 723 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
NCL-203ENST00000417652 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
NCL-203ENST00000417652 HTATSF1O43719 755 aaKnown RBP9.06□□□□□ -0.96
NCL-203ENST00000417652 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
NCL-203ENST00000417652 SLC39A6Q13433 755 aa9.06□□□□□ -0.96
NCL-203ENST00000417652 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
NCL-203ENST00000417652 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
NCL-203ENST00000417652 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
NCL-203ENST00000417652 DCTN1Q14203 1278 aa9.05□□□□□ -0.96
NCL-203ENST00000417652 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
NCL-203ENST00000417652 ANO8Q9HCE9 1232 aaPredicted RBP9.05□□□□□ -0.96
NCL-203ENST00000417652 RRP7AQ9Y3A4 280 aaKnown RBP9.05□□□□□ -0.96
NCL-203ENST00000417652 RGPD3A6NKT7 1758 aaPredicted RBP9.04□□□□□ -0.96
NCL-203ENST00000417652 RGPD4Q7Z3J3 1758 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 CAPN15O75808 1086 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
NCL-203ENST00000417652 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
NCL-203ENST00000417652 FAM9BQ8IZU0 186 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 SPON1Q9HCB6 807 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
NCL-203ENST00000417652 SCN11AQ9UI33 1791 aa9.04□□□□□ -0.96
NCL-203ENST00000417652 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 TOGARAM1Q9Y4F4 1720 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 PHF14O94880 888 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 ZBTB7AO95365 584 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 TMPOP42166 694 aaKnown RBP9.03□□□□□ -0.96
NCL-203ENST00000417652 ZNF827Q17R98 1081 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 CCDC184Q52MB2 194 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
NCL-203ENST00000417652 PNISRQ8TF01 805 aaKnown RBP9.03□□□□□ -0.96
NCL-203ENST00000417652 AKT1S1Q96B36 256 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
NCL-203ENST00000417652 LAS1LQ9Y4W2 734 aaKnown RBP9.03□□□□□ -0.96
NCL-203ENST00000417652 RREB1Q92766 1687 aa9.03□□□□□ -0.96
NCL-203ENST00000417652 GNPATO15228 680 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 STARD3NLO95772 234 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 ITPK1Q13572 414 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 ZNF790Q6PG37 636 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 LINC00116Q8NCU8 138 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 ARXQ96QS3 562 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 THUMPD2Q9BTF0 503 aaKnown RBP9.02□□□□□ -0.97
NCL-203ENST00000417652 TEX13AQ9BXU3 409 aaPredicted RBP9.02□□□□□ -0.97
NCL-203ENST00000417652 MIS18AQ9NYP9 233 aa9.02□□□□□ -0.97
NCL-203ENST00000417652 RTCBQ9Y3I0 505 aaKnown RBP9.02□□□□□ -0.97
NCL-203ENST00000417652 VIRMAQ69YN4 1812 aaKnown RBP9.01□□□□□ -0.97
NCL-203ENST00000417652 APAF1O14727 1248 aa9.01□□□□□ -0.97
NCL-203ENST00000417652 LY75O60449 1722 aa9.01□□□□□ -0.97
NCL-203ENST00000417652 TRAPPC3LQ5T215 181 aa9.01□□□□□ -0.97
NCL-203ENST00000417652 SLC16A10Q8TF71 515 aa9.01□□□□□ -0.97
NCL-203ENST00000417652 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
NCL-203ENST00000417652 POLD1P28340 1107 aa9□□□□□ -0.97
NCL-203ENST00000417652 RFC4P35249 363 aa9□□□□□ -0.97
NCL-203ENST00000417652 CRKLP46109 303 aaKnown RBP9□□□□□ -0.97
NCL-203ENST00000417652 CALD1Q05682 793 aaKnown RBP9□□□□□ -0.97
NCL-203ENST00000417652 RC3H1Q5TC82 1133 aaKnown RBP9□□□□□ -0.97
NCL-203ENST00000417652 DNAJC10Q8IXB1 793 aa9□□□□□ -0.97
NCL-203ENST00000417652 VSIG10Q8N0Z9 540 aa9□□□□□ -0.97
NCL-203ENST00000417652 ZNF496Q96IT1 587 aaPredicted RBP9□□□□□ -0.97
NCL-203ENST00000417652 PDGFDQ9GZP0 370 aaPredicted RBP9□□□□□ -0.97
NCL-203ENST00000417652 MTFR1LQ9H019 292 aa9□□□□□ -0.97
NCL-203ENST00000417652 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
NCL-203ENST00000417652 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
NCL-203ENST00000417652 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
NCL-203ENST00000417652 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
NCL-203ENST00000417652 SNRPA1P09661 255 aaKnown RBP8.99□□□□□ -0.97
NCL-203ENST00000417652 CANXP27824 592 aaKnown RBP8.99□□□□□ -0.97
NCL-203ENST00000417652 SSFA2P28290 1259 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
NCL-203ENST00000417652 KLHL34Q8N239 644 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 PNPLA7Q6ZV29 1317 aa8.99□□□□□ -0.97
NCL-203ENST00000417652 DLG5Q8TDM6 1919 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 KCNQ3O43525 872 aa8.98□□□□□ -0.97
NCL-203ENST00000417652 ZPR1O75312 459 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms