RNA–Protein interactions for RNA: ENST00000417487.1

PDCL3P3-201, Transcript of phosducin-like 3 pseudogene 3, humanhuman

BASIC

Gene PDCL3P3, Length 715 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P3-201ENST00000417487 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
PDCL3P3-201ENST00000417487 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
PDCL3P3-201ENST00000417487 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
PDCL3P3-201ENST00000417487 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
PDCL3P3-201ENST00000417487 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
PDCL3P3-201ENST00000417487 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
PDCL3P3-201ENST00000417487 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
PDCL3P3-201ENST00000417487 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
PDCL3P3-201ENST00000417487 ZNF790Q6PG37 636 aa13.47□□□□□ -0.25
PDCL3P3-201ENST00000417487 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 KCNQ3O43525 872 aa13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 HOXB7P09629 217 aa13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
PDCL3P3-201ENST00000417487 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 MRC1P22897 1456 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 BCAR3O75815 825 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 RRP1P56182 461 aaKnown RBP13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 KRT24Q2M2I5 525 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
PDCL3P3-201ENST00000417487 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
PDCL3P3-201ENST00000417487 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
PDCL3P3-201ENST00000417487 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
PDCL3P3-201ENST00000417487 PIGBQ92521 554 aa13.44□□□□□ -0.26
PDCL3P3-201ENST00000417487 A0A0G2JS52 829 aa13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 GLI3P10071 1580 aa13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 MYT1Q01538 1121 aa13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 FMNL2Q96PY5 1086 aa13.43□□□□□ -0.26
PDCL3P3-201ENST00000417487 BCL9O00512 1426 aa13.42□□□□□ -0.26
PDCL3P3-201ENST00000417487 NEFLP07196 543 aa13.42□□□□□ -0.26
PDCL3P3-201ENST00000417487 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
PDCL3P3-201ENST00000417487 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
PDCL3P3-201ENST00000417487 RGS17Q9UGC6 210 aaPredicted RBP13.42□□□□□ -0.26
PDCL3P3-201ENST00000417487 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 SNRPA1P09661 255 aaKnown RBP13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 RXRBP28702 533 aa13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 ARHGAP45Q92619 1136 aa13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
PDCL3P3-201ENST00000417487 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
PDCL3P3-201ENST00000417487 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
PDCL3P3-201ENST00000417487 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
PDCL3P3-201ENST00000417487 THSD7AQ9UPZ6 1657 aa13.4□□□□□ -0.26
PDCL3P3-201ENST00000417487 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
PDCL3P3-201ENST00000417487 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 PLIN1O60240 522 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 MS4A1P11836 297 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 ASAP1Q9ULH1 1129 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
PDCL3P3-201ENST00000417487 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 SYTL4Q96C24 671 aaPredicted RBP13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 STK31Q9BXU1 1019 aa13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
PDCL3P3-201ENST00000417487 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 KCNQ2O43526 872 aa13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 EIF2S2P20042 333 aaKnown RBP13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 FKBP8Q14318 412 aa13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 SIPA1L3O60292 1781 aaPredicted RBP13.37□□□□□ -0.27
PDCL3P3-201ENST00000417487 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 CANXP27824 592 aaKnown RBP13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 ATF7IPQ6VMQ6 1270 aa13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 API5Q9BZZ5 524 aaKnown RBP13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 USP16Q9Y5T5 823 aa13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 PTPRCP08575 1304 aa13.36□□□□□ -0.27
PDCL3P3-201ENST00000417487 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
PDCL3P3-201ENST00000417487 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDCL3P3-201ENST00000417487 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 HYPKQ9NX55 129 aa13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
PDCL3P3-201ENST00000417487 TRIM27P14373 513 aa13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 PDIA6Q15084 440 aa13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 G2E3Q7L622 706 aa13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
PDCL3P3-201ENST00000417487 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms