RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 BICDL1Q6ZP65 573 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 EYA1Q99502 592 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 DNAJC2Q99543 621 aaKnown RBP15.36■□□□□ 0.05
SCAF8-203ENST00000417268 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 FLIIQ13045 1269 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 ARHGAP31Q2M1Z3 1444 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
SCAF8-203ENST00000417268 ABCC3O15438 1527 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 KDM6BO15054 1643 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 MYD88Q99836 296 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
SCAF8-203ENST00000417268 H3BQV1 296 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
SCAF8-203ENST00000417268 ARHGEF10O15013 1369 aa15.34■□□□□ 0.05
SCAF8-203ENST00000417268 ERICH2A1L162 156 aa15.34■□□□□ 0.05
SCAF8-203ENST00000417268 CPLX1O14810 134 aa15.34■□□□□ 0.05
SCAF8-203ENST00000417268 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
SCAF8-203ENST00000417268 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
SCAF8-203ENST00000417268 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
SCAF8-203ENST00000417268 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
SCAF8-203ENST00000417268 MYOM2P54296 1465 aa15.34■□□□□ 0.05
SCAF8-203ENST00000417268 METP08581 1390 aa15.33■□□□□ 0.05
SCAF8-203ENST00000417268 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.05
SCAF8-203ENST00000417268 MTHFSDQ2M296 383 aaKnown RBP15.33■□□□□ 0.05
SCAF8-203ENST00000417268 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
SCAF8-203ENST00000417268 SBNO1A3KN83 1393 aa15.33■□□□□ 0.04
SCAF8-203ENST00000417268 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
SCAF8-203ENST00000417268 F6X3S4 739 aa15.33■□□□□ 0.04
SCAF8-203ENST00000417268 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
SCAF8-203ENST00000417268 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■□ 21.2
SCAF8-203ENST00000417268 SF3A1Q15459 793 aaKnown RBP15.32■□□□□ 0.04
SCAF8-203ENST00000417268 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
SCAF8-203ENST00000417268 AACSQ86V21 672 aa15.32■□□□□ 0.04
SCAF8-203ENST00000417268 BTG4Q9NY30 223 aa15.32■□□□□ 0.04
SCAF8-203ENST00000417268 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
SCAF8-203ENST00000417268 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
SCAF8-203ENST00000417268 NFXL1Q6ZNB6 911 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 BCL11BQ9C0K0 894 aaPredicted RBP15.31■□□□□ 0.04
SCAF8-203ENST00000417268 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 TRIM27P14373 513 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 RASSF8Q8NHQ8 419 aa15.31■□□□□ 0.04
SCAF8-203ENST00000417268 TRMT112Q9UI30 125 aaKnown RBP15.31■□□□□ 0.04
SCAF8-203ENST00000417268 RAD21O60216 631 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 TEX35Q5T0J7 233 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 DCAF5Q96JK2 942 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 MARCH6O60337 910 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 CCDC85AQ96PX6 553 aaPredicted RBP15.3■□□□□ 0.04
SCAF8-203ENST00000417268 ZBTB3Q9H5J0 574 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 PSMA5P28066 241 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 TRIM29Q14134 588 aa15.3■□□□□ 0.04
SCAF8-203ENST00000417268 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
SCAF8-203ENST00000417268 A0A087WZG4 1122 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 UQCRHLA0A096LP55 91 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 UQCRHP07919 91 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 AK7Q96M32 723 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 IL1RAPL2Q9NP60 686 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 TET3O43151 1660 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 RAB11FIP3O75154 756 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
SCAF8-203ENST00000417268 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 MAP3K5Q99683 1374 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 ZSCAN25Q6NSZ9 544 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 MAP3K2Q9Y2U5 619 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 MBD3O95983 291 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 GPS2Q13227 327 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 IFIT5Q13325 482 aaKnown RBP15.28■□□□□ 0.04
SCAF8-203ENST00000417268 PHACTR3Q96KR7 559 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 AKAP2Q9Y2D5 859 aa15.28■□□□□ 0.04
SCAF8-203ENST00000417268 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
SCAF8-203ENST00000417268 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.04
SCAF8-203ENST00000417268 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 PLA2R1Q13018 1463 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
SCAF8-203ENST00000417268 IL13P35225 146 aa15.27■□□□□ 0.03
SCAF8-203ENST00000417268 HOMER1Q86YM7 354 aa15.27■□□□□ 0.03
SCAF8-203ENST00000417268 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 NOC3LQ8WTT2 800 aaKnown RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 TPM3P06753 285 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 SLC3A2P08195 630 aaKnown RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 GPTP24298 496 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 SART3Q15020 963 aaKnown RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 ZSCAN30Q86W11 494 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 MPNDQ8N594 471 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms