RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 IL13P35225 146 aa11.49□□□□□ -0.57
ITGA6-205ENST00000416789 DDX10Q13206 875 aaKnown RBP11.49□□□□□ -0.57
ITGA6-205ENST00000416789 MEGF6O75095 1541 aa11.49□□□□□ -0.57
ITGA6-205ENST00000416789 MARCH10Q8NA82 808 aaPredicted RBP11.48□□□□□ -0.57
ITGA6-205ENST00000416789 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
ITGA6-205ENST00000416789 VIRMAQ69YN4 1812 aaKnown RBP11.47□□□□□ -0.57
ITGA6-205ENST00000416789 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
ITGA6-205ENST00000416789 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
ITGA6-205ENST00000416789 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
ITGA6-205ENST00000416789 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
ITGA6-205ENST00000416789 ITGB4P16144 1822 aa11.46□□□□□ -0.57
ITGA6-205ENST00000416789 PLSCR1O15162 318 aa11.46□□□□□ -0.57
ITGA6-205ENST00000416789 PNNQ9H307 717 aaKnown RBP11.46□□□□□ -0.57
ITGA6-205ENST00000416789 BTAF1O14981 1849 aa11.46□□□□□ -0.58
ITGA6-205ENST00000416789 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.58
ITGA6-205ENST00000416789 RREB1Q92766 1687 aa11.46□□□□□ -0.58
ITGA6-205ENST00000416789 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
ITGA6-205ENST00000416789 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
ITGA6-205ENST00000416789 IFNL2Q8IZJ0 200 aa11.45□□□□□ -0.58
ITGA6-205ENST00000416789 EP400Q96L91 3159 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 TRIM37O94972 964 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 IFNL1Q8IU54 200 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
ITGA6-205ENST00000416789 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
ITGA6-205ENST00000416789 LY75O60449 1722 aa11.43□□□□□ -0.58
ITGA6-205ENST00000416789 FCHSD2O94868 740 aa11.42□□□□□ -0.58
ITGA6-205ENST00000416789 APBA3O96018 575 aa11.42□□□□□ -0.58
ITGA6-205ENST00000416789 ASTLQ6HA08 431 aaPredicted RBP11.42□□□□□ -0.58
ITGA6-205ENST00000416789 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
ITGA6-205ENST00000416789 NEFMP07197 916 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 TIE1P35590 1138 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 FAM182BQ5T319 152 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
ITGA6-205ENST00000416789 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
ITGA6-205ENST00000416789 NUP188Q5SRE5 1749 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 ZNF831Q5JPB2 1677 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 RGL2O15211 777 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 CYP27B1O15528 508 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
ITGA6-205ENST00000416789 PHKG2P15735 406 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 AKAP4Q5JQC9 854 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
ITGA6-205ENST00000416789 ADAMTS7Q9UKP4 1686 aa11.4□□□□□ -0.59
ITGA6-205ENST00000416789 U2SURPO15042 1029 aaKnown RBP11.39□□□□□ -0.59
ITGA6-205ENST00000416789 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
ITGA6-205ENST00000416789 SMARCC1Q92922 1105 aaPredicted RBP11.39□□□□□ -0.59
ITGA6-205ENST00000416789 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
ITGA6-205ENST00000416789 QSER1Q2KHR3 1735 aa11.38□□□□□ -0.59
ITGA6-205ENST00000416789 ANP32CO43423 234 aa11.38□□□□□ -0.59
ITGA6-205ENST00000416789 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
ITGA6-205ENST00000416789 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
ITGA6-205ENST00000416789 ZNF530Q6P9A1 599 aaPredicted RBP11.38□□□□□ -0.59
ITGA6-205ENST00000416789 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
ITGA6-205ENST00000416789 U2AF1L5P0DN76 240 aaPredicted RBP11.37□□□□□ -0.59
ITGA6-205ENST00000416789 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
ITGA6-205ENST00000416789 U2AF1Q01081 240 aaKnown RBP eCLIP11.37□□□□□ -0.59
ITGA6-205ENST00000416789 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
ITGA6-205ENST00000416789 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
ITGA6-205ENST00000416789 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
ITGA6-205ENST00000416789 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
ITGA6-205ENST00000416789 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
ITGA6-205ENST00000416789 HTATSF1O43719 755 aaKnown RBP11.36□□□□□ -0.59
ITGA6-205ENST00000416789 HMOX1P09601 288 aa11.36□□□□□ -0.59
ITGA6-205ENST00000416789 PRIM1P49642 420 aaKnown RBP11.36□□□□□ -0.59
ITGA6-205ENST00000416789 DEFB132Q7Z7B7 95 aa11.36□□□□□ -0.59
ITGA6-205ENST00000416789 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
ITGA6-205ENST00000416789 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
ITGA6-205ENST00000416789 KCNQ2O43526 872 aa11.35□□□□□ -0.59
ITGA6-205ENST00000416789 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-205ENST00000416789 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
ITGA6-205ENST00000416789 MRC1P22897 1456 aa11.35□□□□□ -0.59
ITGA6-205ENST00000416789 SIPA1L3O60292 1781 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-205ENST00000416789 CICQ96RK0 1608 aaPredicted RBP11.35□□□□□ -0.59
ITGA6-205ENST00000416789 TTLL13PA6NNM8 815 aa11.34□□□□□ -0.59
ITGA6-205ENST00000416789 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
ITGA6-205ENST00000416789 PRKAR2BP31323 418 aa11.34□□□□□ -0.59
ITGA6-205ENST00000416789 EZH2Q15910 746 aaKnown RBP11.34□□□□□ -0.59
ITGA6-205ENST00000416789 SYTL4Q96C24 671 aaPredicted RBP11.34□□□□□ -0.59
ITGA6-205ENST00000416789 C5P01031 1676 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 MAP3K5Q99683 1374 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 CABP4P57796 275 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 WDR43Q15061 677 aaKnown RBP eCLIP11.33□□□□□ -0.6
ITGA6-205ENST00000416789 TXNRD1Q16881 649 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
ITGA6-205ENST00000416789 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
ITGA6-205ENST00000416789 MAPK8IP3Q9UPT6 1336 aa11.33□□□□□ -0.6
ITGA6-205ENST00000416789 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
ITGA6-205ENST00000416789 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
ITGA6-205ENST00000416789 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
ITGA6-205ENST00000416789 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
ITGA6-205ENST00000416789 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
ITGA6-205ENST00000416789 LHX8Q68G74 356 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms