RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 FOXD4L5Q5VV16 416 aaPredicted RBP18.07■□□□□ 0.48
LINC00475-202ENST00000416438 FOXD4L4Q8WXT5 416 aaPredicted RBP18.07■□□□□ 0.48
LINC00475-202ENST00000416438 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
LINC00475-202ENST00000416438 ZDHHC9Q9Y397 364 aa18.06■□□□□ 0.48
LINC00475-202ENST00000416438 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
LINC00475-202ENST00000416438 LMBRD1Q9NUN5 540 aa18.06■□□□□ 0.48
LINC00475-202ENST00000416438 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
LINC00475-202ENST00000416438 TTC21AQ8NDW8 1320 aa18.06■□□□□ 0.48
LINC00475-202ENST00000416438 ESPNB1AK53 854 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 NEK4P51957 841 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 CAVIN1Q6NZI2 390 aaKnown RBP18.05■□□□□ 0.48
LINC00475-202ENST00000416438 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 TRIM44Q96DX7 344 aaPredicted RBP18.05■□□□□ 0.48
LINC00475-202ENST00000416438 LRRCC1Q9C099 1032 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 KDRP35968 1356 aa18.05■□□□□ 0.48
LINC00475-202ENST00000416438 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
LINC00475-202ENST00000416438 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
LINC00475-202ENST00000416438 PRPF40AO75400 957 aaKnown RBP18.04■□□□□ 0.48
LINC00475-202ENST00000416438 CCDC30Q5VVM6 783 aa18.04■□□□□ 0.48
LINC00475-202ENST00000416438 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
LINC00475-202ENST00000416438 NAP1L5Q96NT1 182 aaPredicted RBP18.04■□□□□ 0.48
LINC00475-202ENST00000416438 LRRFIP2Q9Y608 721 aaKnown RBP18.04■□□□□ 0.48
LINC00475-202ENST00000416438 RGPD8O14715 1765 aaPredicted RBP18.03■□□□□ 0.48
LINC00475-202ENST00000416438 ATP8B2P98198 1209 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 USHBP1Q8N6Y0 703 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
LINC00475-202ENST00000416438 PALD1Q9ULE6 856 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 MX1P20591 662 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 NASPP49321 788 aaPredicted RBP18.03■□□□□ 0.48
LINC00475-202ENST00000416438 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 SALL3Q9BXA9 1300 aa18.03■□□□□ 0.48
LINC00475-202ENST00000416438 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
LINC00475-202ENST00000416438 ESYT1Q9BSJ8 1104 aa18.02■□□□□ 0.48
LINC00475-202ENST00000416438 SLIT1O75093 1534 aa18.02■□□□□ 0.47
LINC00475-202ENST00000416438 HOXC9P31274 260 aa18.02■□□□□ 0.47
LINC00475-202ENST00000416438 IL1RAPL2Q9NP60 686 aa18.02■□□□□ 0.47
LINC00475-202ENST00000416438 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.47
LINC00475-202ENST00000416438 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
LINC00475-202ENST00000416438 GNAI3P08754 354 aa18.01■□□□□ 0.47
LINC00475-202ENST00000416438 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
LINC00475-202ENST00000416438 TMX3Q96JJ7 454 aa18.01■□□□□ 0.47
LINC00475-202ENST00000416438 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
LINC00475-202ENST00000416438 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
LINC00475-202ENST00000416438 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
LINC00475-202ENST00000416438 USP44Q9H0E7 712 aa18■□□□□ 0.47
LINC00475-202ENST00000416438 CHMLP26374 656 aa18■□□□□ 0.47
LINC00475-202ENST00000416438 C14orf37Q86TY3 774 aa18■□□□□ 0.47
LINC00475-202ENST00000416438 GPT2Q8TD30 523 aa18■□□□□ 0.47
LINC00475-202ENST00000416438 KCNA6P17658 529 aa17.99■□□□□ 0.47
LINC00475-202ENST00000416438 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
LINC00475-202ENST00000416438 IL25Q9H293 177 aa17.99■□□□□ 0.47
LINC00475-202ENST00000416438 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
LINC00475-202ENST00000416438 MAP4K4O95819 1239 aaPredicted RBP17.98■□□□□ 0.47
LINC00475-202ENST00000416438 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
LINC00475-202ENST00000416438 NUTM1Q86Y26 1132 aa17.98■□□□□ 0.47
LINC00475-202ENST00000416438 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
LINC00475-202ENST00000416438 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
LINC00475-202ENST00000416438 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
LINC00475-202ENST00000416438 EIF2S2P20042 333 aaKnown RBP17.98■□□□□ 0.47
LINC00475-202ENST00000416438 UPF3BQ9BZI7 483 aaKnown RBP17.97■□□□□ 0.47
LINC00475-202ENST00000416438 ZNF445P59923 1031 aa17.97■□□□□ 0.47
LINC00475-202ENST00000416438 HDGFL1Q5TGJ6 251 aa17.97■□□□□ 0.47
LINC00475-202ENST00000416438 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
LINC00475-202ENST00000416438 UBTFL1P0CB47 393 aaPredicted RBP17.96■□□□□ 0.47
LINC00475-202ENST00000416438 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
LINC00475-202ENST00000416438 RBSNQ9H1K0 784 aa17.96■□□□□ 0.47
LINC00475-202ENST00000416438 FER1L4A9Z1Z3 1794 aa17.96■□□□□ 0.47
LINC00475-202ENST00000416438 CCDC173Q0VFZ6 552 aa17.96■□□□□ 0.47
LINC00475-202ENST00000416438 RBM33Q96EV2 1170 aaKnown RBP17.95■□□□□ 0.46
LINC00475-202ENST00000416438 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
LINC00475-202ENST00000416438 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
LINC00475-202ENST00000416438 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
LINC00475-202ENST00000416438 PPP1R9BQ96SB3 815 aa17.95■□□□□ 0.46
LINC00475-202ENST00000416438 SURF6O75683 361 aaKnown RBP17.94■□□□□ 0.46
LINC00475-202ENST00000416438 PPP1R42Q7Z4L9 355 aa17.94■□□□□ 0.46
LINC00475-202ENST00000416438 TMEM63CQ9P1W3 806 aa17.94■□□□□ 0.46
LINC00475-202ENST00000416438 STAP2Q9UGK3 403 aa17.94■□□□□ 0.46
LINC00475-202ENST00000416438 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
LINC00475-202ENST00000416438 ANXA1P04083 346 aa17.93■□□□□ 0.46
LINC00475-202ENST00000416438 MCCP23508 829 aa17.93■□□□□ 0.46
LINC00475-202ENST00000416438 LGR6Q9HBX8 967 aa17.93■□□□□ 0.46
LINC00475-202ENST00000416438 KCNQ3O43525 872 aa17.93■□□□□ 0.46
LINC00475-202ENST00000416438 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
LINC00475-202ENST00000416438 ANP32BQ92688 251 aaKnown RBP17.93■□□□□ 0.46
LINC00475-202ENST00000416438 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
LINC00475-202ENST00000416438 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
LINC00475-202ENST00000416438 XRN1Q8IZH2 1706 aaKnown RBP17.91■□□□□ 0.46
LINC00475-202ENST00000416438 SYCE3A1L190 88 aa17.91■□□□□ 0.46
LINC00475-202ENST00000416438 BRD1O95696 1058 aa17.91■□□□□ 0.46
LINC00475-202ENST00000416438 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
LINC00475-202ENST00000416438 CUL4AQ13619 759 aa17.91■□□□□ 0.46
LINC00475-202ENST00000416438 SRCIN1Q9C0H9 1055 aa17.91■□□□□ 0.46
LINC00475-202ENST00000416438 SOS1Q07889 1333 aaPredicted RBP17.91■□□□□ 0.46
LINC00475-202ENST00000416438 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
LINC00475-202ENST00000416438 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
LINC00475-202ENST00000416438 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
LINC00475-202ENST00000416438 RHPN1Q8TCX5 695 aa17.9■□□□□ 0.46
LINC00475-202ENST00000416438 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms