RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 PROM2Q8N271 834 aa20.45■□□□□ 0.86
CRAT-203ENST00000415948 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
CRAT-203ENST00000415948 EZH2Q15910 746 aaKnown RBP20.44■□□□□ 0.86
CRAT-203ENST00000415948 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
CRAT-203ENST00000415948 ERVV-2B6SEH9 535 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
CRAT-203ENST00000415948 NEUROD2Q15784 382 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 ASAP1Q9ULH1 1129 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 TUBGCP6Q96RT7 1819 aa20.43■□□□□ 0.86
CRAT-203ENST00000415948 KCNQ4P56696 695 aa20.42■□□□□ 0.86
CRAT-203ENST00000415948 C5P01031 1676 aa20.42■□□□□ 0.86
CRAT-203ENST00000415948 COL5A3P25940 1745 aaPredicted RBP20.41■□□□□ 0.86
CRAT-203ENST00000415948 RIPK4P57078 832 aa20.41■□□□□ 0.86
CRAT-203ENST00000415948 ATG3Q9NT62 314 aa20.41■□□□□ 0.86
CRAT-203ENST00000415948 TMOD3Q9NYL9 352 aa20.41■□□□□ 0.86
CRAT-203ENST00000415948 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
CRAT-203ENST00000415948 CABP4P57796 275 aa20.4■□□□□ 0.86
CRAT-203ENST00000415948 SLC39A6Q13433 755 aa20.4■□□□□ 0.86
CRAT-203ENST00000415948 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
CRAT-203ENST00000415948 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
CRAT-203ENST00000415948 KCNQ3O43525 872 aa20.39■□□□□ 0.85
CRAT-203ENST00000415948 CCDC125Q86Z20 511 aa20.39■□□□□ 0.85
CRAT-203ENST00000415948 LRRC4BQ9NT99 713 aa20.39■□□□□ 0.85
CRAT-203ENST00000415948 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
CRAT-203ENST00000415948 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
CRAT-203ENST00000415948 PLSCR1O15162 318 aa20.37■□□□□ 0.85
CRAT-203ENST00000415948 BAG6P46379 1132 aa20.37■□□□□ 0.85
CRAT-203ENST00000415948 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
CRAT-203ENST00000415948 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
CRAT-203ENST00000415948 NEFMP07197 916 aa20.35■□□□□ 0.85
CRAT-203ENST00000415948 SF3B2Q13435 895 aaKnown RBP20.35■□□□□ 0.85
CRAT-203ENST00000415948 ANO8Q9HCE9 1232 aaPredicted RBP20.35■□□□□ 0.85
CRAT-203ENST00000415948 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
CRAT-203ENST00000415948 MYH14Q7Z406 1995 aaKnown RBP20.34■□□□□ 0.85
CRAT-203ENST00000415948 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
CRAT-203ENST00000415948 ITPK1Q13572 414 aa20.33■□□□□ 0.85
CRAT-203ENST00000415948 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
CRAT-203ENST00000415948 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.85
CRAT-203ENST00000415948 TEFQ10587 303 aa20.32■□□□□ 0.84
CRAT-203ENST00000415948 LAMB4A4D0S4 1761 aa20.31■□□□□ 0.84
CRAT-203ENST00000415948 UBR3Q6ZT12 1888 aa20.3■□□□□ 0.84
CRAT-203ENST00000415948 ZNF827Q17R98 1081 aa20.3■□□□□ 0.84
CRAT-203ENST00000415948 AMIGO3Q86WK7 504 aa20.3■□□□□ 0.84
CRAT-203ENST00000415948 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
CRAT-203ENST00000415948 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
CRAT-203ENST00000415948 PTCD1O75127 700 aaKnown RBP20.29■□□□□ 0.84
CRAT-203ENST00000415948 SIK1P57059 783 aa20.29■□□□□ 0.84
CRAT-203ENST00000415948 WWC1Q8IX03 1113 aa20.29■□□□□ 0.84
CRAT-203ENST00000415948 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
CRAT-203ENST00000415948 ZNF496Q96IT1 587 aaPredicted RBP20.29■□□□□ 0.84
CRAT-203ENST00000415948 CCNL1Q9UK58 526 aaPredicted RBP20.29■□□□□ 0.84
CRAT-203ENST00000415948 ZNF521Q96K83 1311 aa20.28■□□□□ 0.84
CRAT-203ENST00000415948 QSER1Q2KHR3 1735 aa20.28■□□□□ 0.84
CRAT-203ENST00000415948 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
CRAT-203ENST00000415948 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
CRAT-203ENST00000415948 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
CRAT-203ENST00000415948 CASZ1Q86V15 1759 aa20.28■□□□□ 0.84
CRAT-203ENST00000415948 TAF7Q15545 349 aaPredicted RBP20.27■□□□□ 0.84
CRAT-203ENST00000415948 SMIM5Q71RC9 77 aa20.27■□□□□ 0.84
CRAT-203ENST00000415948 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
CRAT-203ENST00000415948 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
CRAT-203ENST00000415948 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
CRAT-203ENST00000415948 LMOD3Q0VAK6 560 aa20.26■□□□□ 0.83
CRAT-203ENST00000415948 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
CRAT-203ENST00000415948 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
CRAT-203ENST00000415948 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
CRAT-203ENST00000415948 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
CRAT-203ENST00000415948 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
CRAT-203ENST00000415948 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
CRAT-203ENST00000415948 CHL1O00533 1208 aa20.23■□□□□ 0.83
CRAT-203ENST00000415948 ATP6V1AP38606 617 aa20.23■□□□□ 0.83
CRAT-203ENST00000415948 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
CRAT-203ENST00000415948 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
CRAT-203ENST00000415948 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
CRAT-203ENST00000415948 MBIPQ9NS73 344 aa20.22■□□□□ 0.83
CRAT-203ENST00000415948 LAS1LQ9Y4W2 734 aaKnown RBP20.22■□□□□ 0.83
CRAT-203ENST00000415948 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
CRAT-203ENST00000415948 TSR2Q969E8 191 aaKnown RBP20.21■□□□□ 0.83
CRAT-203ENST00000415948 TSPYL4Q9UJ04 414 aa20.21■□□□□ 0.83
CRAT-203ENST00000415948 TTC5Q8N0Z6 440 aa20.2■□□□□ 0.82
CRAT-203ENST00000415948 PSDA5PKW4 1024 aaPredicted RBP20.19■□□□□ 0.82
CRAT-203ENST00000415948 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
CRAT-203ENST00000415948 IFT57Q9NWB7 429 aa20.19■□□□□ 0.82
CRAT-203ENST00000415948 CYP19A1P11511 503 aaPredicted RBP20.18■□□□□ 0.82
CRAT-203ENST00000415948 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
CRAT-203ENST00000415948 R3HDM1Q15032 1099 aaKnown RBP20.17■□□□□ 0.82
CRAT-203ENST00000415948 SLC15A2Q16348 729 aa20.17■□□□□ 0.82
CRAT-203ENST00000415948 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
CRAT-203ENST00000415948 USP16Q9Y5T5 823 aa20.17■□□□□ 0.82
CRAT-203ENST00000415948 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
CRAT-203ENST00000415948 CRKLP46109 303 aaKnown RBP20.16■□□□□ 0.82
CRAT-203ENST00000415948 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
CRAT-203ENST00000415948 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
CRAT-203ENST00000415948 PNPLA7Q6ZV29 1317 aa20.16■□□□□ 0.82
CRAT-203ENST00000415948 FANCIQ9NVI1 1328 aa20.16■□□□□ 0.82
CRAT-203ENST00000415948 VSIG10Q8N0Z9 540 aa20.15■□□□□ 0.82
CRAT-203ENST00000415948 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
CRAT-203ENST00000415948 ZBTB1Q9Y2K1 713 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms