RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 RIPK4P57078 832 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 CALD1Q05682 793 aaKnown RBP8.63□□□□□ -1.03
HDAC8-211ENST00000415409 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 MED1Q15648 1581 aaPredicted RBP8.63□□□□□ -1.03
HDAC8-211ENST00000415409 LRRC7Q96NW7 1537 aa8.63□□□□□ -1.03
HDAC8-211ENST00000415409 DSG2Q14126 1118 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
HDAC8-211ENST00000415409 PTCD2Q8WV60 388 aaKnown RBP8.62□□□□□ -1.03
HDAC8-211ENST00000415409 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 ITSN1Q15811 1721 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 ANKRD26Q9UPS8 1709 aa8.62□□□□□ -1.03
HDAC8-211ENST00000415409 KIF20BQ96Q89 1820 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 NRKQ7Z2Y5 1582 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 IL16Q14005 1332 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 NPHP3Q7Z494 1330 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 NALCNQ8IZF0 1738 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 HOXC9P31274 260 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 HSPA1LP34931 641 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 XPCQ01831 940 aaPredicted RBP8.61□□□□□ -1.03
HDAC8-211ENST00000415409 SULT6B1Q6IMI4 303 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 MST1RQ04912 1400 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 RTL1A6NKG5 1358 aa8.61□□□□□ -1.03
HDAC8-211ENST00000415409 SHPRHQ149N8 1683 aa8.6□□□□□ -1.03
HDAC8-211ENST00000415409 ARHGAP33O14559 1287 aa8.6□□□□□ -1.03
HDAC8-211ENST00000415409 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
HDAC8-211ENST00000415409 IP6K1Q92551 441 aa8.6□□□□□ -1.03
HDAC8-211ENST00000415409 ARHGEF10O15013 1369 aa8.6□□□□□ -1.03
HDAC8-211ENST00000415409 GCP02774 474 aa8.59□□□□□ -1.03
HDAC8-211ENST00000415409 CT47B1P0C2W7 299 aaPredicted RBP8.59□□□□□ -1.03
HDAC8-211ENST00000415409 PIP4K2BP78356 416 aa8.59□□□□□ -1.03
HDAC8-211ENST00000415409 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
HDAC8-211ENST00000415409 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
HDAC8-211ENST00000415409 PHACTR3Q96KR7 559 aa8.59□□□□□ -1.03
HDAC8-211ENST00000415409 USP19O94966 1318 aa8.58□□□□□ -1.04
HDAC8-211ENST00000415409 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
HDAC8-211ENST00000415409 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
HDAC8-211ENST00000415409 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.04
HDAC8-211ENST00000415409 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
HDAC8-211ENST00000415409 IGSF1Q8N6C5 1336 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 GNAI1P63096 354 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 ADGRD1Q6QNK2 874 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 BRINP3Q76B58 766 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 ARHGEF25Q86VW2 580 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 GAS2L2Q8NHY3 880 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 LTV1Q96GA3 475 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-211ENST00000415409 EYA1Q99502 592 aa8.57□□□□□ -1.04
HDAC8-211ENST00000415409 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
HDAC8-211ENST00000415409 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
HDAC8-211ENST00000415409 IFT57Q9NWB7 429 aa8.56□□□□□ -1.04
HDAC8-211ENST00000415409 PLIN1O60240 522 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 PSEN2P49810 448 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 RTF1Q92541 710 aaKnown RBP8.55□□□□□ -1.04
HDAC8-211ENST00000415409 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
HDAC8-211ENST00000415409 TSR2Q969E8 191 aaKnown RBP8.55□□□□□ -1.04
HDAC8-211ENST00000415409 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
HDAC8-211ENST00000415409 KDRP35968 1356 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 PIK3C2AO00443 1686 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 KIF1AQ12756 1690 aa8.55□□□□□ -1.04
HDAC8-211ENST00000415409 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
HDAC8-211ENST00000415409 HTATSF1O43719 755 aaKnown RBP8.54□□□□□ -1.04
HDAC8-211ENST00000415409 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
HDAC8-211ENST00000415409 EXOSC9Q06265 439 aaKnown RBP8.54□□□□□ -1.04
HDAC8-211ENST00000415409 EXOC6Q8TAG9 804 aa8.54□□□□□ -1.04
HDAC8-211ENST00000415409 CCDC136Q96JN2 1154 aa8.54□□□□□ -1.04
HDAC8-211ENST00000415409 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
HDAC8-211ENST00000415409 TNS3Q68CZ2 1445 aa8.54□□□□□ -1.04
HDAC8-211ENST00000415409 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 BCAR3O75815 825 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 MS4A1P11836 297 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
HDAC8-211ENST00000415409 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
HDAC8-211ENST00000415409 PDE3AQ14432 1141 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 MTHFSDQ2M296 383 aaKnown RBP8.53□□□□□ -1.04
HDAC8-211ENST00000415409 ANKRD24Q8TF21 1146 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 ZNF428Q96B54 188 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 SLIT3O75094 1523 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 NFAT5O94916 1531 aa8.53□□□□□ -1.04
HDAC8-211ENST00000415409 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 PDE4AP27815 886 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 NBPF6Q5VWK0 638 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 B4GALNT3Q6L9W6 998 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 NBPF4Q96M43 638 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 CRBNQ96SW2 442 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 THUMPD2Q9BTF0 503 aaKnown RBP8.52□□□□□ -1.05
HDAC8-211ENST00000415409 CRISPLD2Q9H0B8 497 aa8.52□□□□□ -1.05
HDAC8-211ENST00000415409 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-211ENST00000415409 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 USP54Q70EL1 1684 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 ALDH1L2Q3SY69 923 aa8.51□□□□□ -1.05
HDAC8-211ENST00000415409 PLEKHO1Q53GL0 409 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-211ENST00000415409 USHBP1Q8N6Y0 703 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms