RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
LINC01888-201ENST00000415138 LSM11P83369 360 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01888-201ENST00000415138 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
LINC01888-201ENST00000415138 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
LINC01888-201ENST00000415138 OXER1Q8TDS5 423 aa12.63□□□□□ -0.39
LINC01888-201ENST00000415138 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
LINC01888-201ENST00000415138 LTN1O94822 1766 aa12.63□□□□□ -0.39
LINC01888-201ENST00000415138 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
LINC01888-201ENST00000415138 COL14A1Q05707 1796 aaKnown RBP12.62□□□□□ -0.39
LINC01888-201ENST00000415138 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
LINC01888-201ENST00000415138 NSD2O96028 1365 aa12.62□□□□□ -0.39
LINC01888-201ENST00000415138 EVA1CP58658 441 aa12.62□□□□□ -0.39
LINC01888-201ENST00000415138 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
LINC01888-201ENST00000415138 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
LINC01888-201ENST00000415138 BBXQ8WY36 941 aaPredicted RBP12.62□□□□□ -0.39
LINC01888-201ENST00000415138 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
LINC01888-201ENST00000415138 USP19O94966 1318 aa12.62□□□□□ -0.39
LINC01888-201ENST00000415138 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
LINC01888-201ENST00000415138 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
LINC01888-201ENST00000415138 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
LINC01888-201ENST00000415138 LRP6O75581 1613 aa12.61□□□□□ -0.39
LINC01888-201ENST00000415138 PTGER2P43116 358 aa12.6□□□□□ -0.39
LINC01888-201ENST00000415138 AMPHP49418 695 aa12.6□□□□□ -0.39
LINC01888-201ENST00000415138 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
LINC01888-201ENST00000415138 USP21Q9UK80 565 aa12.6□□□□□ -0.39
LINC01888-201ENST00000415138 SLIT3O75094 1523 aa12.6□□□□□ -0.39
LINC01888-201ENST00000415138 AFF2P51816 1311 aa12.6□□□□□ -0.39
LINC01888-201ENST00000415138 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 PLCH1Q4KWH8 1693 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
LINC01888-201ENST00000415138 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
LINC01888-201ENST00000415138 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
LINC01888-201ENST00000415138 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
LINC01888-201ENST00000415138 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
LINC01888-201ENST00000415138 RGPD5Q99666 1765 aa12.58□□□□□ -0.39
LINC01888-201ENST00000415138 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
LINC01888-201ENST00000415138 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
LINC01888-201ENST00000415138 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
LINC01888-201ENST00000415138 CPDO75976 1380 aa12.57□□□□□ -0.4
LINC01888-201ENST00000415138 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
LINC01888-201ENST00000415138 PPM1GO15355 546 aaPredicted RBP12.57□□□□□ -0.4
LINC01888-201ENST00000415138 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
LINC01888-201ENST00000415138 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
LINC01888-201ENST00000415138 VSIG10Q8N0Z9 540 aa12.57□□□□□ -0.4
LINC01888-201ENST00000415138 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
LINC01888-201ENST00000415138 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
LINC01888-201ENST00000415138 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
LINC01888-201ENST00000415138 UNC5CLQ8IV45 518 aa12.56□□□□□ -0.4
LINC01888-201ENST00000415138 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
LINC01888-201ENST00000415138 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
LINC01888-201ENST00000415138 TRPC5Q9UL62 973 aaPredicted RBP12.56□□□□□ -0.4
LINC01888-201ENST00000415138 MFSD10Q14728 455 aa12.55□□□□□ -0.4
LINC01888-201ENST00000415138 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
LINC01888-201ENST00000415138 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
LINC01888-201ENST00000415138 NFAT5O94916 1531 aa12.54□□□□□ -0.4
LINC01888-201ENST00000415138 RRS1Q15050 365 aaKnown RBP12.54□□□□□ -0.4
LINC01888-201ENST00000415138 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
LINC01888-201ENST00000415138 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
LINC01888-201ENST00000415138 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
LINC01888-201ENST00000415138 FBLN1P23142 703 aa12.53□□□□□ -0.4
LINC01888-201ENST00000415138 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
LINC01888-201ENST00000415138 IP6K1Q92551 441 aa12.53□□□□□ -0.4
LINC01888-201ENST00000415138 MAP3K19Q56UN5 1328 aa12.53□□□□□ -0.4
LINC01888-201ENST00000415138 COL18A1P39060 1754 aa12.52□□□□□ -0.41
LINC01888-201ENST00000415138 RXRBP28702 533 aa12.52□□□□□ -0.41
LINC01888-201ENST00000415138 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.41
LINC01888-201ENST00000415138 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.41
LINC01888-201ENST00000415138 SLIT2O94813 1529 aa12.52□□□□□ -0.41
LINC01888-201ENST00000415138 ABCC6O95255 1503 aa12.52□□□□□ -0.41
LINC01888-201ENST00000415138 A0A0G2JS52 829 aa12.51□□□□□ -0.41
LINC01888-201ENST00000415138 RRP9O43818 475 aaKnown RBP12.51□□□□□ -0.41
LINC01888-201ENST00000415138 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
LINC01888-201ENST00000415138 KIF24Q5T7B8 1368 aa12.51□□□□□ -0.41
LINC01888-201ENST00000415138 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
LINC01888-201ENST00000415138 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
LINC01888-201ENST00000415138 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
LINC01888-201ENST00000415138 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
LINC01888-201ENST00000415138 HOXC9P31274 260 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
LINC01888-201ENST00000415138 RALBP1Q15311 655 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 VPS72Q15906 364 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 EMILIN1Q9Y6C2 1016 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 FLT4P35916 1363 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
LINC01888-201ENST00000415138 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
LINC01888-201ENST00000415138 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
LINC01888-201ENST00000415138 EVI5O60447 810 aa12.49□□□□□ -0.41
LINC01888-201ENST00000415138 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
LINC01888-201ENST00000415138 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
LINC01888-201ENST00000415138 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
LINC01888-201ENST00000415138 POLKQ9UBT6 870 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms