RNA–Protein interactions for RNA: ENST00000414677.1

LINC00658-201, long intergenic non-protein coding RNA 658, humanhuman

TSL 2

Gene LINC00658, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00658-201ENST00000414677 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
LINC00658-201ENST00000414677 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
LINC00658-201ENST00000414677 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
LINC00658-201ENST00000414677 TJP1Q07157 1748 aa16.31■□□□□ 0.2
LINC00658-201ENST00000414677 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
LINC00658-201ENST00000414677 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
LINC00658-201ENST00000414677 CCNL1Q9UK58 526 aaPredicted RBP16.31■□□□□ 0.2
LINC00658-201ENST00000414677 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
LINC00658-201ENST00000414677 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
LINC00658-201ENST00000414677 FCHSD2O94868 740 aa16.3■□□□□ 0.2
LINC00658-201ENST00000414677 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
LINC00658-201ENST00000414677 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
LINC00658-201ENST00000414677 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
LINC00658-201ENST00000414677 SMARCC1Q92922 1105 aaPredicted RBP16.29■□□□□ 0.2
LINC00658-201ENST00000414677 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
LINC00658-201ENST00000414677 STK32BQ9NY57 414 aa16.29■□□□□ 0.2
LINC00658-201ENST00000414677 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
LINC00658-201ENST00000414677 CABP4P57796 275 aa16.28■□□□□ 0.2
LINC00658-201ENST00000414677 NFATC2IPQ8NCF5 419 aa16.28■□□□□ 0.2
LINC00658-201ENST00000414677 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
LINC00658-201ENST00000414677 CEMIPQ8WUJ3 1361 aa16.27■□□□□ 0.2
LINC00658-201ENST00000414677 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
LINC00658-201ENST00000414677 SIK1P57059 783 aa16.27■□□□□ 0.2
LINC00658-201ENST00000414677 ITPK1Q13572 414 aa16.27■□□□□ 0.2
LINC00658-201ENST00000414677 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
LINC00658-201ENST00000414677 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
LINC00658-201ENST00000414677 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
LINC00658-201ENST00000414677 AMIGO3Q86WK7 504 aa16.25■□□□□ 0.19
LINC00658-201ENST00000414677 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
LINC00658-201ENST00000414677 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
LINC00658-201ENST00000414677 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
LINC00658-201ENST00000414677 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
LINC00658-201ENST00000414677 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
LINC00658-201ENST00000414677 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
LINC00658-201ENST00000414677 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
LINC00658-201ENST00000414677 SMIM5Q71RC9 77 aa16.21■□□□□ 0.19
LINC00658-201ENST00000414677 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
LINC00658-201ENST00000414677 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
LINC00658-201ENST00000414677 MCM10Q7L590 875 aa16.2■□□□□ 0.18
LINC00658-201ENST00000414677 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
LINC00658-201ENST00000414677 PTGER2P43116 358 aa16.19■□□□□ 0.18
LINC00658-201ENST00000414677 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
LINC00658-201ENST00000414677 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
LINC00658-201ENST00000414677 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
LINC00658-201ENST00000414677 ADAMTS8Q9UP79 889 aa16.19■□□□□ 0.18
LINC00658-201ENST00000414677 COL23A1Q86Y22 540 aaPredicted RBP16.18■□□□□ 0.18
LINC00658-201ENST00000414677 KCNQ3O43525 872 aa16.17■□□□□ 0.18
LINC00658-201ENST00000414677 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
LINC00658-201ENST00000414677 TEFQ10587 303 aa16.17■□□□□ 0.18
LINC00658-201ENST00000414677 CCDC146Q8IYE0 955 aa16.17■□□□□ 0.18
LINC00658-201ENST00000414677 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
LINC00658-201ENST00000414677 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
LINC00658-201ENST00000414677 AK7Q96M32 723 aa16.16■□□□□ 0.18
LINC00658-201ENST00000414677 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
LINC00658-201ENST00000414677 MTFR1LQ9H019 292 aa16.16■□□□□ 0.18
LINC00658-201ENST00000414677 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
LINC00658-201ENST00000414677 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
LINC00658-201ENST00000414677 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
LINC00658-201ENST00000414677 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC00658-201ENST00000414677 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
LINC00658-201ENST00000414677 LAMB4A4D0S4 1761 aa16.14■□□□□ 0.17
LINC00658-201ENST00000414677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
LINC00658-201ENST00000414677 GNPATO15228 680 aa16.14■□□□□ 0.17
LINC00658-201ENST00000414677 ANP32CO43423 234 aa16.14■□□□□ 0.17
LINC00658-201ENST00000414677 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
LINC00658-201ENST00000414677 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
LINC00658-201ENST00000414677 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
LINC00658-201ENST00000414677 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
LINC00658-201ENST00000414677 HEG1Q9ULI3 1381 aa16.13■□□□□ 0.17
LINC00658-201ENST00000414677 SSFA2P28290 1259 aa16.13■□□□□ 0.17
LINC00658-201ENST00000414677 CRKLP46109 303 aaKnown RBP16.13■□□□□ 0.17
LINC00658-201ENST00000414677 RC3H1Q5TC82 1133 aaKnown RBP16.13■□□□□ 0.17
LINC00658-201ENST00000414677 SLC16A10Q8TF71 515 aa16.13■□□□□ 0.17
LINC00658-201ENST00000414677 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
LINC00658-201ENST00000414677 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
LINC00658-201ENST00000414677 PHF14O94880 888 aa16.12■□□□□ 0.17
LINC00658-201ENST00000414677 NEFMP07197 916 aa16.12■□□□□ 0.17
LINC00658-201ENST00000414677 CYP19A1P11511 503 aaPredicted RBP16.12■□□□□ 0.17
LINC00658-201ENST00000414677 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
LINC00658-201ENST00000414677 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
LINC00658-201ENST00000414677 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
LINC00658-201ENST00000414677 RIPK4P57078 832 aa16.11■□□□□ 0.17
LINC00658-201ENST00000414677 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
LINC00658-201ENST00000414677 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
LINC00658-201ENST00000414677 RPS6KA4O75676 772 aa16.1■□□□□ 0.17
LINC00658-201ENST00000414677 TTC5Q8N0Z6 440 aa16.1■□□□□ 0.17
LINC00658-201ENST00000414677 FLAD1Q8NFF5 587 aa16.1■□□□□ 0.17
LINC00658-201ENST00000414677 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
LINC00658-201ENST00000414677 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
LINC00658-201ENST00000414677 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
LINC00658-201ENST00000414677 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
LINC00658-201ENST00000414677 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
LINC00658-201ENST00000414677 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
LINC00658-201ENST00000414677 MSH5O43196 834 aa16.08■□□□□ 0.16
LINC00658-201ENST00000414677 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.16
LINC00658-201ENST00000414677 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
LINC00658-201ENST00000414677 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
LINC00658-201ENST00000414677 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
LINC00658-201ENST00000414677 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
LINC00658-201ENST00000414677 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms